3J61,3U5I


Conserved Protein Domain Family
Ribosomal_60s

?
pfam00428: Ribosomal_60s 
Click on image for an interactive view with Cn3D
60s Acidic ribosomal protein
This family includes archaebacterial L12, eukaryotic P0, P1 and P2.
Statistics
?
PSSM-Id: 366094
View PSSM: pfam00428
Aligned: 72 rows
Threshold Bit Score: 30.6949
Threshold Setting Gi: 166223881
Created: 22-Apr-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3J61_q       234 YPTIAAAPHMFLNGYKNVLAVAVETEYSYPH--ADKIKEYLKDPSKF-AVAAPVAADSGAAAPSAAKEEEKKEEPe--eE 308 Japanese rice
Q4E3A4       238 IPTAATLPHMIMDAFKTLLGASVATEYEFDEfdGKNLRKAALEGNl--GGGVADAAAAADTGAAAAPAAAAEPEEe---D 312 Trypanosoma cruzi
Q8II61       231 vITEASYPHVFVEAFKNIVALIIDSDYTFPL--MENIKKMVENPEAFaAVAAPASAAKADEPKKEEAKKVEEEEEe---E 305 Plasmodium falc...
Q6FTP0       229 YPTLPSVGHTLINNYKNLLAVAIASSYHYPE--IEELIDRIENPENYaS-AAPAAAAASGDAAPAEEAAAEEEDE----- 300 [Candida] glabrata
Q0TZB5       229 FPTLPSVMHSVVNSYKKVLAVAIETDYEWEE--IAELKDRIANPDKYaS-AGPAAGGAAASSGGAEAAKAEEKEEekees 305 Parastagonospor...
Q5B9P6       229 YPTLPSVIHSVVNSYKKVLAVAVETEYSWPE--IEELKDRIANPEAYaS-AAPAAAAGGAAPAAAAEAAPAEEAEe---- 301 Aspergillus nid...
P14869       231 YPTVASVPHSIINGYKRVLALSVETEYTFPL--TEKVKAFLADPSAFaA-AAPAAAATTAAPAAAAAPAKAEAKEes-ee 306 house mouse
XP_001422456 232 YPTLASVPHSIVNAYKNVLAISIGTDYTFEL--AQKVKDYLANPGAFaS-AAPAAGGDAAAGGAAKAAAVEEEEEe---- 304 Ostreococcus lu...
XP_001610383 231 fPTSLSITHSLIGAFKNCVALALENDYCFKE--MQGIKDRLDNPELF---AAAAPTAGAVEAVQEAAPEAAEEPE----E 301 Babesia bovis T2Bo
XP_003721948 238 IPTPSTIGPMLVDAFKNLLAVSVATSYEFEEhnGKELREAAINGLl--AGSCSAAAEPAAAAPAAPSAAAKEEPEe---S 312 Leishmania majo...
3J61_q       309 SDGDLGm-SLF 318 Japanese rice
Q4E3A4       313 DDDDFGmgALF 323 Trypanosoma cruzi
Q8II61       306 EDGFMGf-GMF 315 Plasmodium falciparum 3D7
Q6FTP0       301 SDDDMGf-GLF 310 [Candida] glabrata
Q0TZB5       306 EDDDMGf-GLF 315 Parastagonospora nodorum SN15
Q5B9P6       302 SDEDMGf-GLF 311 Aspergillus nidulans
P14869       307 SDEDMGf-GLF 316 house mouse
XP_001422456 305 --aEMDf-DLF 312 Ostreococcus lucimarinus CCE9901
XP_001610383 302 EEDDMGf-SLF 311 Babesia bovis T2Bo
XP_003721948 313 DEDDFGmgGLF 323 Leishmania major strain Friedlin
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap