3J61,3U5I,2ZKR


Conserved Protein Domain Family
Ribosomal_60s

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pfam00428: Ribosomal_60s 
Click on image for an interactive view with Cn3D
60s Acidic ribosomal protein
This family includes archaebacterial L12, eukaryotic P0, P1 and P2.
Statistics
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PSSM-Id: 334071
View PSSM: pfam00428
Aligned: 72 rows
Threshold Bit Score: 30.6942
Threshold Setting Gi: 166223881
Created: 14-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3J61_QQ      234 YPTIAAAPHMFLNGYKNVLAVAVETEYSYPH--ADKIKEYLKDPSKF---AVAAPVAADSGAAAPSAAKEEEKKEEPe-- 306 bread wheat
Q4E3A4       238 IPTAATLPHMIMDAFKTLLGASVATEYEFDEfdGKNLRKAALEGNl----GGGVADAAAAADTGAAAAPAAAAEPEEe-- 311 Trypanosoma cruzi
Q8II61       231 vITEASYPHVFVEAFKNIVALIIDSDYTFPL--MENIKKMVENPEAFa--AVAAPASAAKADEPKKEEAKKVEEEEEe-- 304 Plasmodium falc...
Q6FTP0       229 YPTLPSVGHTLINNYKNLLAVAIASSYHYPE--IEELIDRIENPENYa--S-AAPAAAAASGDAAPAEEAAAEEEDE--- 300 [Candida] glabrata
Q0TZB5       229 FPTLPSVMHSVVNSYKKVLAVAIETDYEWEE--IAELKDRIANPDKYa--S-AGPAAGGAAASSGGAEAAKAEEKEEeke 303 Parastagonospor...
Q5B9P6       229 YPTLPSVIHSVVNSYKKVLAVAVETEYSWPE--IEELKDRIANPEAYa--S-AAPAAAAGGAAPAAAAEAAPAEEAEe-- 301 Aspergillus nid...
P14869       231 YPTVASVPHSIINGYKRVLALSVETEYTFPL--TEKVKAFLADPSAFa--A-AAPAAAATTAAPAAAAAPAKAEAKEes- 304 house mouse
XP_001610383 231 fPTSLSITHSLIGAFKNCVALALENDYCFKE--MQGIKDRLDNPELF-----AAAAPTAGAVEAVQEAAPEAAEEPE--- 300 Babesia bovis T2Bo
XP_003721948 238 IPTPSTIGPMLVDAFKNLLAVSVATSYEFEEhnGKELREAAINGLl----AGSCSAAAEPAAAAPAAPSAAAKEEPEe-- 311 Leishmania majo...
3U5I_QQ      229 YPTLPSVGHTLINNYKDLLAVAIAASYHYPE--IEDLVDRIENPEKYaaaAPAATSAASGDAAPAEEAAAE-----Ee-- 299 Saccharomyces c...
3J61_QQ      307 eESDGDLGm-SLF 318 bread wheat
Q4E3A4       312 -DDDDDFGmgALF 323 Trypanosoma cruzi
Q8II61       305 -EEDGFMGf-GMF 315 Plasmodium falciparum 3D7
Q6FTP0       301 --SDDDMGf-GLF 310 [Candida] glabrata
Q0TZB5       304 esEDDDMGf-GLF 315 Parastagonospora nodorum SN15
Q5B9P6       302 --SDEDMGf-GLF 311 Aspergillus nidulans
P14869       305 eeSDEDMGf-GLF 316 house mouse
XP_001610383 301 -EEEDDMGf-SLF 311 Babesia bovis T2Bo
XP_003721948 312 -SDEDDFGmgGLF 323 Leishmania major strain Friedlin
3U5I_QQ      300 eESDDDMGf-GLF 311 Saccharomyces cerevisiae S288c
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