Conserved Protein Domain Family
LIM

?
pfam00412: LIM 
Click on image for an interactive view with Cn3D
LIM domain
This family represents two copies of the LIM structural domain.
Statistics
?
PSSM-Id: 278823
View PSSM: pfam00412
Aligned: 34 rows
Threshold Bit Score: 45.016
Threshold Setting Gi: 18266876
Created: 11-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

pfam00412 is a member of the superfamily cl02475.
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
2D8X_A          8 CHQCGEFII----GRVIK--AMNNSWHPECFRCDLCQEVLADIG--FVKNAg-R----HLCRPCHNREK 63
gi 341941019   28 CARCNKLVIpdsqRTKTTlkALGKYYHESCFTCQDCQKPLKPKYfpYQVDK--TsesiLLCQYDYFRRH 94
2YPA_C         83 CASCDKRIR----AYEMTmrVKDKVYHLECFKCAACQKHFCVGDryLLINS--D----IVCEQDIYEWT 141
gi 21264444   107 CSSCNEGIV----PDHVVrkASNHVYHVECFQCFICKRSLETGEefYLIADdaR----LVCKDDYEQAR 167
gi 1708828     87 CAACQQGIP----PTQVVrrAQDFVYHLHCFACIVCKRQLATGDefYLMEDs-R----LVCKADYETAK 146
gi 1708826     63 CAGCAQGIS----PSDLVrrARSKVFHLNCFTCMMCNKQLSTGEelYIIDEn-K----FVCKEDYLNNS 122
gi 2506818    127 CAGCDGKLE----KEDLVrrARDKVFHIRCFQCSVCQRLLDTGDqlYIMEGn-R----FVCQSDFQTAT 186
gi 1708561     89 CAKCNIGFC----SSDLVmrARDNVYHMECFRCSVCSRHLLPGDefSLRDE--E----LLCRADHgllm 147
gi 485955943  115 CSGCMEKIA----PTEFVmrALECVYHLSCFCCCVCERQLRKGDefVLKEG--Q----LLCKSDYEKEK 173
gi 1351218    303 CAGCDELIF----SNEYTq-AENQNWHLKHFCCFDCDHILAGKIyvMVTDK-------PVCKPCYVKNH 359
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap