2LXD,1G47,2JTN,2D8X,2XQN,2COR


Conserved Protein Domain Family
LIM

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pfam00412: LIM 
Click on image for an interactive view with Cn3D
LIM domain
This family represents two copies of the LIM structural domain.
Statistics
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PSSM-Id: 334066
View PSSM: pfam00412
Aligned: 40 rows
Threshold Bit Score: 52.7338
Threshold Setting Gi: 20981688
Created: 14-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
2LXD_A        13 CASCDKRIRAYEMTmrVKDKVYHLECFKCAACQKHFSVGDryLLINS-DIVCEQDIYEWT 71
gi 1352723   503 CSGCQKPITGRCIT--AMGKKFHPEHFVCAFCLKQLNKGTf-KEQND-KPYCQNCFLKLF 558
gi 1352723   444 CGGCARAILENYIS--ALNTLWHPECFVCRECFTPFINGSf-FEHDG-QPYCEVHYHERR 499
gi 18266876   10 CERCKGGFAPAEKIvnSNGELYHEQCFVCAQCFQQFPEGLf-YEFEG-RKYCEHDFQMLF 67
gi 485955943  56 CEGCQRPISDRFLMr-VNESSWHEECLQCAVCQQALTTSc--YFRDR-KLYCKQDYQQLF 111
gi 132532     24 CAGCNRKIKDRYLLk-ALDKYWHEDCLKCACCDCRLGEVGstLYTKAnLILCRRDYLRLF 82
gi 231559    148 CSGCGRQIQDRFYLs-AVEKRWHASCLQCYACRQPLERESscYSRDG-NIYCKNDYYSFF 205
gi 1708826     4 CAGCKRPILDRFLLn-VLDRAWHVKCVQCCECKCNLTEKc--FSREG-KLYCKNDFFRCF 59
gi 2506818    68 CAACAQPILDRYVFt-VLGKCWHQSCLRCCDCRAPMSMTc--FSRDG-LILCKTDFSRRY 123
1G47_A        14 CERCKGGFAPAEKIvnSNGELYHEQCFVCAQCFQQFPEGLf-YEFEG-RKYCEHDFQMLF 71
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