3ODT,6EMK,5YZV,5YZV,6MZC,6MZC,6MZC,3J65,3J65,3J65,3J65,3FM0,3FM0,6AH0,5MQF,5I2T,5I2T,1VYH,1VYH,1VYH,3DM0,5GAN,3MKQ,3ZEY,3JCR,3JCR,6B20,3J60,6AZ1,5G04,5GMK,5GMK,3ZWL,3C99,3IZB,5JPQ,6BX3,2HES,3JB9,3ACP


Conserved Protein Domain Family
WD40

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pfam00400: WD40 
Click on image for an interactive view with Cn3D
WD domain, G-beta repeat
Statistics
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PSSM-Id: 366076
View PSSM: pfam00400
Aligned: 1503 rows
Threshold Bit Score: 24.2462
Threshold Setting Gi: 0
Created: 22-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3ODT_A        132 GSLVYN--L--Q-----AHn--ASVWDAKvvSFSENKFlt-------aS--A-DKTIKLWQ 171  baker's yeast
P21304        466 MVLSRD--F--DvgnvlTSsfaPDI-EV------AGTMvi-------gG--V-NKVLKLWD 505  Saccharomyces cerevisiae S288C
O94042        450 YNVIRT--FvlE-----GG---YAL-CCK--FLPGGTLiv-------vG--FkNGDLELYD 488  Candida albicans
O00628         58 LRLFRS--F--Dwn--------dgLFDV--------TWsennehvlitC--SgDGSLQLWD 96   human
O16302       1283 LNVRNIpiR--P-----RH---TT-TAVT--FASHDTVfv-------aG--V-RKHLFLWN 1320 Caenorhabditis elegans
P13712        286 EKLQSN--R--E-----KHd--GGVNSCR--FNYKNSLil-------aSadS-NGRLNLWD 325  Saccharomyces cerevisiae S288C
O60174        318 EQADFT--F--------GFnd-slISCCTwvSPEHGDIhqi----lvgC--S-NGYLALWD 360  Schizosaccharomyces pombe 972h-
O14186         81 LLQKST--Q--T-----KHiscNDV-KWG--SSFASNLif-------tC--SpLGNLNVWD 120  Schizosaccharomyces pombe 972h-
O95834        240 SKRQGL--F--E-----KHekpKYVLCVT--FLEGGDVv--------tG--DsGGNLYVWG 279  human
XP_002490564  174 KTRPNI-----------RNdnnDCVYDAK--FSFHDPNii-------mScnS-DSHLQLWD 213  Komagataella phaffii GS115
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