3L43,3W6N,2J68,2QPT


Conserved Protein Domain Family
Dynamin_N

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pfam00350: Dynamin_N 
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Dynamin family
Statistics
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PSSM-Id: 334025
View PSSM: pfam00350
Aligned: 69 rows
Threshold Bit Score: 94.9785
Threshold Setting Gi: 81717434
Created: 15-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3L43_A         47 IAVVGGQSAGKSSVLENFVGRDFLPR--GSGIVTRRPLVLQLITSk--------AEYAEF----LhckgKKFTDFDEVRL 112
gi 81580718    46 IAFCGHFSAGKSTIMNHLYKAQLLPT--SPIPTSANVVKIEKGMdr------vvVTVKSGeqyeY----DGAYSAEELKQ 113
gi 81787077    38 LAFCGHYSAGKSTILNRLIGAEVLPT--SPIPTSANIIKIAQGPlg------lkVEKNNGelstF----TGEIPWDQVRE 105
gi 81746312    47 IALVGHFSAGKSSMINHLMGSELLAN--SPIPTSANIVKITSGQgv------anVYFHNGdkrvY----REPYDLQEIKK 114
gi 122539556  592 IGVFGTFSAGKSSLINALLGEHILVS--SPNPTTAATTEISYGDEs-------yITLKSQ----S----QLLDEINAVVE 654
gi 81674570   592 VGVFGTFSAGKSSLINALLGDNYLVS--SPNPTTAATTELSYGKEs-------qITLKSK----E----QLLEEVNHVLE 654
gi 81787077   625 VSLFGAFSAGKSSFANALLGEAVLPV--SPNPTTATVTtVCRPTDqyah-rsaiIKMKNR----A----DLDEEIQAVAD 693
gi 81746312   626 IALFGAFSAGKSSFANALIGEEVLPV--SPNPTTAAVNRIRPVQEpyeh-gqvvVSVKSE----A----AMIEDIQRITK 694
gi 6939622     49 IAFCGHFSAGKSSLINSLCGKTVLPS--GPVPTSANVVSIRHGRSralihparsAENPEP----E----IVEASLSELAE 118
2QPT_A         68 VLVAGQYSTGKTSFIQYLLEQEVPGSrvGPEPTTDCFVAVMHGETegtv--pgnALVVDP----E----KPFRKLNPFGN 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3L43_A        113 EIEAETDRVTGMNKGISSI--------------------------------------------------------PINLR 136
gi 81580718   114 ICKDGDEVIG-----------------------------------------------------------------VHIYR 128
gi 81787077   106 WGMNGEEISS-----------------------------------------------------------------LTLTL 120
gi 81746312   115 YSTDKQQISR-----------------------------------------------------------------IDIST 129
gi 122539556  655 YQDMSYSTIEDFINSDLEKlkshlnknqlafiqavekhyklyvnmle-ngekhainqqelkkwsaedeyatfvktVHIAL 733
gi 81674570   655 FYEISFNTLDNFIKSDLEKlkskleknqlafisaiekhyemytsmle-hslihtvsleeikkwsaedeyatfvktVHLKL 733
gi 81787077   694 QLDLKLSLKNiqswkpkrmqvatnqqrsyvnylstlqaslkd--qewtlgseqvidleelalwvgteshacliqeVMLYY 771
gi 81746312   695 AYRPPEGTLEELMEWVDKKaitkdenlqrmyrsylaaiesgyqqmkdylgsekmitlqefssfvteeskacfikeMDLYY 774
gi 6939622    119 YCKNGGAYES-----------------------------------------------------------------VEVWE 133
2QPT_A        138 TFLNRFMC-AQLPNQVLE-------------------------------------------------------------- 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3L43_A        137 VYSPHVLNLTLIDLPGITKVPVGDQppdieyqirEMIMQFItRENCLILAVTPANTDLANSDALKLAKEVDPQGLR---- 212
gi 81580718   129 NDAPIPEGVMLVDTPGIDSTDDAHQ---------LATESTL-HLADVIFYMMDYNHVQSEVNLQFVKELKQRNKTV---- 194
gi 81787077   121 PLPFLNETSCIFDTPGVDSTDPTHQ---------AVTTEQL-YTTDGIVYVMDYNHVQSETNLYFLKQLSDEKKPI---- 186
gi 81746312   130 STTILPEGTAILDTPGIDAADDADR---------MLTESAL-HLADYMLYITDYNHVQSEVNLQFLQTMEDKQLPY---- 195
gi 122539556  734 MHDWLKGKI-IVDSLGLHSNNQRHT---------NETEQIL-TSSDLILYVSYFNHSFTDNDKAFIEHMKDMNQLNenqa 802
gi 81674570   734 PLDWLKGKI-IIDSLGLHSNNQRHT---------NETEQIL-TSSDLILYVTYFNHSFTDNDKAFIEHMKDMNQLNenqa 802
gi 81787077   772 DCDLTRAGVVLVDTPGVNSIHGRHT---------NVAFTQL-KESDAIFYLTYYNHSFSKADQYFLQQMAKVNEAFhddk 841
gi 81746312   775 DCGITQQGITLVDTPGADSINARHT---------NVSFEYI-KHADAILYVTYYNHALSRADKDFLMQLGRVKDVFel-d 843
gi 6939622    134 DIPILSGGGVLLDTPGVDSTDHGHA---------MATHSAL-HWADIVFYVMDYNHVQSENNLSFAKSLSDWGKPL---- 199
2QPT_A        155 -------SISIIDTPGILSGAKQRVsrgy--dfpAVLRWFA-ERVDLIILLFDAHKLEISDEFSEAIGALRGHEDK---- 220

                  ....*....
3L43_A        213 -TIGVITKL 220
gi 81580718   195 -YLVVNQID 202
gi 81787077   187 -VIVINQID 194
gi 81746312   196 -VVIVNQID 203
gi 122539556  803 fKMVINAAd 811
gi 81674570   803 fKMIINavd 811
gi 81787077   842 lYFVINAAD 850
gi 81746312   844 kMFFIVNAS 852
gi 6939622    200 -YLIINQId 207
2QPT_A        221 -IRVVLNKA 228
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