3BBO,1VW3,4CE4,3J21


Conserved Protein Domain Family
Ribosomal_L2

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pfam00181: Ribosomal_L2 
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Ribosomal Proteins L2, RNA binding domain
Statistics
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PSSM-Id: 306650
View PSSM: pfam00181
Aligned: 30 rows
Threshold Bit Score: 68.7877
Threshold Setting Gi: 74967169
Created: 13-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3BBO_E  38 GRNAR-GIITARHRGGGHKRLYRKIDFRR-------NEKD--IYGKIVTIEYDPNRNAYICLIHYGDGEKR-----YILH 102 spinach
Q9VTF8  68 GRDPVsGRLVAKGIGGGIKQQYRWVKWVRd------GPTEgaQEELVLEVLRDGCRTAKVALVAVGD-ELK-----YILA 135 fruit fly
Q9HPD1  11 GRGTStFRAPSHRYKA-------ELSHKR-------TEDTdvLAGEVIDVEHDPARSAPVARVAFEDDDQR-----LVLA 71  Halobacterium salinar...
P13023  11 GKAGSvFGAHTHHRKG--TPRFRALDYAE-------RQGY--VKGVVKEIIHDPGRGAPLARVVFKGLTQFkldkqLFIA 79  Dictyostelium discoideum
Q8U001  11 GKGSPtFKSPSHRFRG--AVKYIPLNYTQ--------EKT--LRGVVEEIMHDPGRTAPVARVKFENGIEK-----LIIA 73  Pyrococcus furiosus D...
Q9UXA5  11 GKGSPtFRNPGWLRIG--KVRYPNIFG------------H--FIGKVIDIVHNPGMNAPVALVKLENGTKF-----LMQA 69  Sulfolobus solfataric...
Q9YFN1  11 GRGTPtYRSRAHIHPG--PAKYPPLSG---------D--T--LRGKVVELIHDPGRYVPLARVVREDGVEF-----LMPA 70  Aeropyrum pernix K1
O26113  11 GRGTPtYRSASHRFKG--KIKYRAYDSIE-------SEGS--LKGKVVDIMHDPGRTAPVARVKFENGEER-----LILA 74  Methanothermobacter t...
O28357  11 GKGTPtYRAPSHRYKT--DAKLLRFKD-----------EV--VAAKVIDIQHDSARNGPVALVKLPDGSET-----YILA 70  Archaeoglobus fulgidu...
4CE4_D  84 GRNHT-GQIQVHGIGGGHKQRYRMIDFLRfrpehesKPGP--FEEKVIAVRYDPCRSADIALVAGGN-RKR-----WIIA 154 pig
3BBO_E 103 PRGAIIGDTIVS 114 spinach
Q9VTF8 136 TENMKAGDILKT 147 fruit fly
Q9HPD1  72 SEGVGVGDTIEI 83  Halobacterium salinarum NRC-1
P13023  80 PEGMHTGQFVFA 91  Dictyostelium discoideum
Q8U001  74 PEGLLVGQEIYi 85  Pyrococcus furiosus DSM 3638
Q9UXA5  70 IQGLVVNQKIEF 81  Sulfolobus solfataricus P2
Q9YFN1  71 AEGMYVGQIIEI 82  Aeropyrum pernix K1
O26113  75 PEALMLNEEVEC 86  Methanothermobacter thermautotrophicus str. Delta H
O28357  71 VEGLGTGDVVYA 82  Archaeoglobus fulgidus DSM 4304
4CE4_D 155 TENMKAGDTVln 166 pig
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