5B1L


Conserved Protein Domain Family
Histone

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pfam00125: Histone 
Click on image for an interactive view with Cn3D
Core histone H2A/H2B/H3/H4
Statistics
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PSSM-Id: 333859
View PSSM: pfam00125
Aligned: 30 rows
Threshold Bit Score: 73.2158
Threshold Setting Gi: 81905940
Created: 14-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5B1L_A          4 MARTKQTARKSTGGKAPRKQLATKv-------aRKSAPatggvKKPHRYHPGTVALREIRRYQKSTELLIRKLPFQRLVR 76
gi 75073588     1 MARNVTKRNKRC------------------------------------RGHQKAIYKKKSHSSSESGLRNYSLYINRVLK 44
gi 81905869     1 MAKPTFKRQCYIK-----------------------------------RHLRPLYRKHSRCSSINLGHGNYSLYINRVLK 45
gi 2493550     94 DNGNSDGADGEMDEDDEEYDVFRNvgqg-lvghYKEIM-----IRYWQELINEIESTNEPGSEHQDDFKSHSLPFAR-IR 166
gi 75016024     1 MNLKNNEND--------------------------------------DTNNFWKEQLFEICNMSPEDLKIHNLPISR-IK 41
gi 74966798     1 MARLKQRPNRILN-----------------------------------TSTKTSSAKKKKKRISRSTRSGLTFPVGRIHR 45
gi 74920783    38 QAREDALLYVESLCLRLLATLCAKppphtvmdvEDRII-----RTFPTPIDRWALGEARETIDKSKKKKPV-LPVDRVHT 111
gi 75297915     1 MAGKGGKGLLAAKTT---------------------------------AAKSAEKDKGKKAPVSRSSRAGLQFPVGRIHR 47
gi 75314165     1 MVCNTN------------------------------------------ILKDVSTKISAFENVRMIMVEGEMFQVARIHK 38
gi 159113122    1 MSKVETKRLM----------------------------------------KKTEAGDKGDAKRKHKRHETYATYIYKVLR 40
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
5B1L_A         77 --EIAQ---DFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 135
gi 75073588    45 --EVVP-------QKGISSRTIDIINTMINDMFERISTEACNLMYYRKRCTLTPEDIEKAVYLL 99
gi 81905869    46 --EVVP-------NRGISSYSVDIMNILINDIFERIATEACQQMFLRKRCTLTPGDIQQAVHLL 100
gi 2493550    167 --KVMK---TDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQKS 225
gi 75016024    42 --KIMKeddEIKSNQMVSADTPVLLAKACELFIMELTSNAWKYTEEGKRRTLQRQDVVSAACKK 103
gi 74966798    46 --KLRE---TTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESKKSRVTPRHLHLAIYGD 104
gi 74920783   112 --LLQK----EVLQYKIDSSVSLFLVAVLEYISADILKLAGYYVKNIRHIEITREDIEVAMCAD 169
gi 75297915    48 --QLKQ---RTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGD 106
gi 75314165    39 --QLKN---RVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGD 97
gi 159113122   41 seNIRS---EADTDLGISNKGMEVMNSLVNDLFERIASEASNLAKISKRNTIGKKDIESAAKLv 101
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