5B1L


Conserved Protein Domain Family
Histone

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pfam00125: Histone 
Click on image for an interactive view with Cn3D
Core histone H2A/H2B/H3/H4
Statistics
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PSSM-Id: 333859
View PSSM: pfam00125
Aligned: 30 rows
Threshold Bit Score: 73.2158
Threshold Setting Gi: 81905940
Created: 14-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5B1L_A          4 MARTKQTARKSTGGKAPRKQLATKv-------aRKSAPatggvKKPHRYHPGTVALREIRRYQKSTELLIRKLPFQRLVR 76   house mouse
Q8WNR4          1 MARNVTKRNKRC------------------------------------RGHQKAIYKKKSHSSSESGLRNYSLYINRVLK 44   cattle
Q9D9Z7          1 MAKPTFKRQCYIK-----------------------------------RHLRPLYRKHSRCSSINLGHGNYSLYINRVLK 45   house mouse
Q02516         94 DNGNSDGADGEMDEDDEEYDVFRNvgqg-lvghYKEIM-----IRYWQELINEIESTNEPGSEHQDDFKSHSLPFAR-IR 166  Saccharomyces...
Q8IL74          1 MNLKNNEND--------------------------------------DTNNFWKEQLFEICNMSPEDLKIHNLPISR-IK 41   Plasmodium fa...
Q23429          1 MARLKQRPNRILN-----------------------------------TSTKTSSAKKKKKRISRSTRSGLTFPVGRIHR 45   Caenorhabditi...
Q7PVU9         38 QAREDALLYVESLCLRLLATLCAKppphtvmdvEDRII-----RTFPTPIDRWALGEARETIDKSKKKKPV-LPVDRVHT 111  Anopheles gam...
Q84MP7          1 MAGKGGKGLLAAKTT---------------------------------AAKSAEKDKGKKAPVSRSSRAGLQFPVGRIHR 47   Japanese rice
Q9T0H7          1 MVCNTN------------------------------------------ILKDVSTKISAFENVRMIMVEGEMFQVARIHK 38   thale cress
XP_001706788    1 MSKVETKRLM----------------------------------------KKTEAGDKGDAKRKHKRHETYATYIYKVLR 40   Giardia lambl...
5B1L_A         77 --EIAQ---DFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 135  house mouse
Q8WNR4         45 --EVVP-------QKGISSRTIDIINTMINDMFERISTEACNLMYYRKRCTLTPEDIEKAVYLL 99   cattle
Q9D9Z7         46 --EVVP-------NRGISSYSVDIMNILINDIFERIATEACQQMFLRKRCTLTPGDIQQAVHLL 100  house mouse
Q02516        167 --KVMK---TDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQKS 225  Saccharomyces cerevisiae S288c
Q8IL74         42 --KIMKeddEIKSNQMVSADTPVLLAKACELFIMELTSNAWKYTEEGKRRTLQRQDVVSAACKK 103  Plasmodium falciparum 3D7
Q23429         46 --KLRE---TTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESKKSRVTPRHLHLAIYGD 104  Caenorhabditis elegans
Q7PVU9        112 --LLQK----EVLQYKIDSSVSLFLVAVLEYISADILKLAGYYVKNIRHIEITREDIEVAMCAD 169  Anopheles gambiae str. PEST
Q84MP7         48 --QLKQ---RTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGD 106  Japanese rice
Q9T0H7         39 --QLKN---RVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGD 97   thale cress
XP_001706788   41 seNIRS---EADTDLGISNKGMEVMNSLVNDLFERIASEASNLAKISKRNTIGKKDIESAAKLv 101  Giardia lamblia ATCC 50803
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