Conserved Protein Domain Family
fn3

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pfam00041: fn3 
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Fibronectin type III domain
Statistics
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PSSM-Id: 306538
View PSSM: pfam00041
Aligned: 98 rows
Threshold Bit Score: 40.8613
Threshold Setting Gi: 503535125
Created: 11-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

pfam00041 is a member of the superfamily cl21522.
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3UP1_B        114 EAPFDLSVVYReGANDFVVTFNTSHlqKKYVKVLMHDVaY-RQEKDEN-------KWTHVNLSST--Kl-TLLQRKLQPA 182
gi 400398     611 SAPKLEGQMGE-DGNSIKVKLIKQD--DGGSPIRHYLVkYr-ALSSEW--------KPEIRLPSG--Sd-HVMLKSLDWN 675
gi 317373584 1221 SEPGRLAFNVV-SSTVTQLSWAEPA--ETNGEITAYEVcY-GLVNDDNrp---igPMKKVLVDNP--KnrMLLIENLRES 1291
gi 317373584 1642 SAPGPLVFTAL-SPDSLQLSWERPR--RPNGDIVGYLVtC-EMAQGGG-------PATAFRVDGDspEs-RLTVPGLSEN 1709
gi 745756043  959 GRVERFHPTDV-QPSEINFEWSLPSs-EANGVIRQFSIaY-TNINNLT--------DAGMQDFES--EeaFGVIKNLKPG 1025
gi 12230900   438 SAVSIMHQVSR-TVDSITLSWSQPD--QPNGVILDYELqY-YEKNLSE--------LNSTAVKSP--Tn-TVTVQNLKAG 502
gi 341940656  442 SSIALVQAKEV-TRYSVALAWLEPD--RPNGVILEYEVkY-YEKDQNE---------RSYRIVRT--AarNTDIKGLNPL 506
gi 73920223   911 GPPSNITIRFQ-TPDVLCVTWDPPTreHRNGIITRYDVqFhKKIDHGL--------GSERNMTLR--K---AVFTNLEEN 976
gi 462740     929 SPPSFLKITNP-TLDSLTLEWGSPT--HPNGVLTSYILkF-QPINNTHel----gPLVEIRIPAN--Es-SLILKNLNYS 997
gi 6760654    918 SPVQGLDAYPL-GSSAFMLHWKKPL--YPNGKLTGYKIyY-EEV-KESyvgerreYDPHITDPRV--T--RMKMAGLKPN 988
                          90       100
                  ....*....|....*....|
3UP1_B        183 AMYEIKVRSIPDHYfKGFWS 202
gi 400398     676 AEYEVYVVAENQQ----GKS 691
gi 317373584 1292 QPYRYTVKARNGAG-WGPER 1310
gi 317373584 1710 VPYKFKVQARTTEG-FGPER 1728
gi 745756043 1026 ETYVFKIQAKTAIG-FGPER 1044
gi 12230900   503 TIYVFQVRARTVAG-YGRYS 521
gi 341940656  507 TSYVFHVRARTAAG-YGDFS 525
gi 73920223   977 TEYIFRVRAYTKQG-AGPFS 995
gi 462740     998 TRYKFYFNAQTSV---GSGS 1014
gi 6760654    989 SKYRISITATTKMG-EGSEH 1007
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