4MYC,3GD7,3J5S,3J5S


Conserved Protein Domain Family
ABC_tran

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pfam00005: ABC_tran 
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ABC transporter
ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain pfam00664. These four domains may belong to a single polypeptide as in CFTR, or belong in different polypeptide chains.
Statistics
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PSSM-Id: 333758
View PSSM: pfam00005
Aligned: 59 rows
Threshold Bit Score: 93.0917
Threshold Setting Gi: 127359
Created: 13-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4MYC_A  355 LKNASFTIPAGWKTAIVGSSGSGKSTILKLVFRFYDP--ESGRILIN-GRDIKE--------YDIDALRKVIGVVPQD-- 421  Saccharomyces cerev...
Q07698   41 LRDIELTVYRGETIGIVGHNGAGKSTLLQLITGVMQP--DCGQI---------------------TRTGRVVGLLELG-- 95   Aeromonas salmonicida
Q07756   30 LRGLDMYVRRGERYGIMGTNGAGKSSLINIILGLTPP--DRGTVTVF-GKDMRR---------QGHLARARIGVVPQD-- 95   Azorhizobium caulin...
P41233  916 VDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPP--TSGTAYIL-GKDIRS---------EMSSIRQNLGVCPQH-- 981  house mouse
P25371  406 LNEISGIVKPGQILAIMGGSGAGKTTLLDILAMKRKTghVSGSIKVN-GISMDR-----------KSFSKIIGFVDQD-- 471  Saccharomyces cerev...
P33302  176 LKPMDGCLNPGELLVVLGRPGSGCTTLLKSISSNTHG--------FDlGADTKIsysgysgdDIKKHFRGEVVYNAEA-- 245  Saccharomyces cerev...
Q02856   22 LNSLNLSIKPGEIHAIMGKNGSGKSTLAKVIAGHPSYkiTNGQILFE-NQDVTE---------IEPEDRSHLGIFLAFqy 91   Antithamnion sp.
P31060  276 LNNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDH----PQGY-----SNDLTLfgrrrgsgETIWDIKKHIGYVSSS-- 344  Escherichia coli K-12
Q02151   19 LKDITWKVNPGENWVILGLNGSGKSSLLKLILAEEWK--TSGEITVL-NTQFGN--------GEIPKLRKRISVVGSFia 87   Lactococcus lactis ...
P05529   23 FNNLSLKIEQGELIGLLGENPAGKTTLFNLIRGGVSN--YEGTLKRN-------------------FSGGELVSLPQV-- 79   Escherichia coli
4MYC_A  422 TPLFND-T-IWENVKFGridAT---DEEVITVVEKAQ--------LAPLIKKLPQGF---DTIVge-rgLMISGGEKQ-- 482  Saccharomyces cerev...
Q07698   96 SGFNPEfT-GRENIFFN---GA---ILGMSQREMDDR--------LERILSFAAIGDf-iDQPV-----KNYSSGMMV-- 152  Aeromonas salmonicida
Q07756   96 DCLEQNmT-PYENVMLY---GR---LCRMTASEARKR--------ADQIFEKFSMMDc-aNRPV-----RLLSGGMRR-- 152  Azorhizobium caulin...
P41233  982 NVLFDMlT-VEEHIWFY---AR---LKGLSEKHVKAE--------MEQMALDVGLPPsklKSKT-----SQLSGGMQR-- 1039 house mouse
P25371  472 DFLLPTlT-VFETVLNS---ALlrlPKALSFEAKKAR--------VYKVLEELRIIDi-kDRIIgnefdRGISGGEKR-- 536  Saccharomyces cerev...
P33302  246 DVHLPHlT-VFETLVTV---AR---LKTPQNRIKGVDresyanhlAEVAMATYGLSHt-rNTKVgndivRGVSGGERK-- 315  Saccharomyces cerev...
Q02856   92 PVEIPGvT-NADFLR----------IAYNAKRAFDNKeeldplsfFSFIENKISNIDl-nSTFLsrnvnEGFSGGEKK-- 157  Antithamnion sp.
P31060  345 LHLDYRvStTVRNVILS---GYf-dSIGIYQAVSDRQ--------QKLVQQWLDILGi-dKRTAda-pfHSLSWGQQR-- 408  Escherichia coli K-12
Q02151   88 ERFQPNi--KAENLVYT---GKf-nSSMLYKPYTDQE--------LDEARQLLRQMGa--KSLIgr-nyASLSQGEKQ-- 148  Lactococcus lactis ...
P05529   80 INLSGTlR-NEEVLDLI--------CCFNKLTKKQAW--------TDVNHKWNDNFFi-rYDKIrrkrtYTVSYGEKRwl 141  Escherichia coli
4MYC_A  483 RLAIARVLLKNARIMFFDEATS 504  Saccharomyces cerevisiae S288c
Q07698  153 RLAFSVIINTDPDVLIIDEALA 174  Aeromonas salmonicida
Q07756  153 LTMVARALVNDPYVIILDEATV 174  Azorhizobium caulinodans ORS 571
P41233 1040 KLSVALAFVGGSKVVILDEPTA 1061 house mouse
P25371  537 RVSIACELVTSPLVLFLDEPTS 558  Saccharomyces cerevisiae S288c
P33302  316 RVSIAEVSICGSKFQCWDNATR 337  Saccharomyces cerevisiae S288c
Q02856  158 KNEILQMSLLNSKLAILDETDS 179  Antithamnion sp.
P31060  409 LALIVRALVKHPTLLILDEPLQ 430  Escherichia coli K-12
Q02151  149 VLLIARSLILKPELLILDEATN 170  Lactococcus lactis subsp. lactis Il1403
P05529  142 IISLMVTLCKNARLFLLDEPTV 163  Escherichia coli
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