4MYC,5XJY,3GD7,3J5S,3J5S


Conserved Protein Domain Family
ABC_tran

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pfam00005: ABC_tran 
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ABC transporter
ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain pfam00664. These four domains may belong to a single polypeptide as in CFTR, or belong in different polypeptide chains.
Statistics
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PSSM-Id: 365804
View PSSM: pfam00005
Aligned: 60 rows
Threshold Bit Score: 94.2465
Threshold Setting Gi: 127359
Created: 18-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4MYC_A        355 LKNASFTIPAGWKTAIVGSSGSGKSTILKLVFRFYDP--ESGRILIN-GRDIKE--------YDIDALRKVIGVVPQD-- 421  Saccharomyces...
Q07698         41 LRDIELTVYRGETIGIVGHNGAGKSTLLQLITGVMQP--DCGQI---------------------TRTGRVVGLLELG-- 95   Aeromonas sal...
Q07756         30 LRGLDMYVRRGERYGIMGTNGAGKSSLINIILGLTPP--DRGTVTVF-GKDMRR---------QGHLARARIGVVPQD-- 95   Azorhizobium ...
P41233        916 VDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPP--TSGTAYIL-GKDIRS---------EMSSIRQNLGVCPQH-- 981  house mouse
P25371        406 LNEISGIVKPGQILAIMGGSGAGKTTLLDILAMKRKTghVSGSIKVN-GISMDR-----------KSFSKIIGFVDQD-- 471  Saccharomyces...
P33302        176 LKPMDGCLNPGELLVVLGRPGSGCTTLLKSISSNTHG--------FDlGADTKIsysgysgdDIKKHFRGEVVYNAEA-- 245  Saccharomyces...
Q02856         22 LNSLNLSIKPGEIHAIMGKNGSGKSTLAKVIAGHPSYkiTNGQILFE-NQDVTE---------IEPEDRSHLGIFLAFqy 91   Antithamnion sp.
P31060        276 LNNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDH----PQGY-----SNDLTLfgrrrgsgETIWDIKKHIGYVSSS-- 344  Escherichia c...
Q02151         19 LKDITWKVNPGENWVILGLNGSGKSSLLKLILAEEWK--TSGEITVL-NTQFGN--------GEIPKLRKRISVVGSFia 87   Lactococcus l...
WP_103456332   19 LHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLSP--SEGQVKVL-GRAPND-----------PQVRRQLGYLPEN-- 82   Pseudomonas s...
4MYC_A        422 TPLFND-T-IWENVKFGridAT---DEEVITVVEKAQ--------LAPLIKKLPQGF---DTIVge-rgLMISGGEKQRL 484  Saccharomyces...
Q07698         96 SGFNPEfT-GRENIFFN---GA---ILGMSQREMDDR--------LERILSFAAIGDf-iDQPV-----KNYSSGMMVRL 154  Aeromonas sal...
Q07756         96 DCLEQNmT-PYENVMLY---GR---LCRMTASEARKR--------ADQIFEKFSMMDc-aNRPV-----RLLSGGMRRLT 154  Azorhizobium ...
P41233        982 NVLFDMlT-VEEHIWFY---AR---LKGLSEKHVKAE--------MEQMALDVGLPPsklKSKT-----SQLSGGMQRKL 1041 house mouse
P25371        472 DFLLPTlT-VFETVLNS---ALlrlPKALSFEAKKAR--------VYKVLEELRIIDi-kDRIIgnefdRGISGGEKRRV 538  Saccharomyces...
P33302        246 DVHLPHlT-VFETLVTV---AR---LKTPQNRIKGVDresyanhlAEVAMATYGLSHt-rNTKVgndivRGVSGGERKRV 317  Saccharomyces...
Q02856         92 PVEIPGvT-NADFLR----------IAYNAKRAFDNKeeldplsfFSFIENKISNIDl-nSTFLsrnvnEGFSGGEKKKN 159  Antithamnion sp.
P31060        345 LHLDYRvStTVRNVILS---GYf-dSIGIYQAVSDRQ--------QKLVQQWLDILGi-dKRTAda-pfHSLSWGQQRLA 410  Escherichia c...
Q02151         88 ERFQPNi--KAENLVYT---GKf-nSSMLYKPYTDQE--------LDEARQLLRQMGa--KSLIgr-nyASLSQGEKQVL 150  Lactococcus l...
WP_103456332   83 VTFYPQlS-GRETLR----------HFARLKGAALTQ--------VDELLEQVGLAHa-aDRRV-----KTYSKGMRQRL 137  Pseudomonas s...
4MYC_A        485 AIARVLLKNARIMFFDEATS 504  Saccharomyces cerevisiae S288C
Q07698        155 AFSVIINTDPDVLIIDEALA 174  Aeromonas salmonicida
Q07756        155 MVARALVNDPYVIILDEATV 174  Azorhizobium caulinodans ORS 571
P41233       1042 SVALAFVGGSKVVILDEPTA 1061 house mouse
P25371        539 SIACELVTSPLVLFLDEPTS 558  Saccharomyces cerevisiae S288C
P33302        318 SIAEVSICGSKFQCWDNATR 337  Saccharomyces cerevisiae S288C
Q02856        160 EILQMSLLNSKLAILDETDS 179  Antithamnion sp.
P31060        411 LIVRALVKHPTLLILDEPLQ 430  Escherichia coli K-12
Q02151        151 LIARSLILKPELLILDEATN 170  Lactococcus lactis subsp. lactis Il1403
WP_103456332  138 GLAQALLGEPRLLLLDEPTV 157  Pseudomonas stutzeri
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