2RKO,2X8A,3WHK,3CF0,5G4F,5GJQ,3D8B,5GJQ,5T0G,5GJQ,2QZ4,3J94,4XGU,1HQC,3PVS,1IN4,2CHG,4W5W,1SXJ,3U5Z,5UDB,4XGC


Conserved Protein Domain Family
AAA

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pfam00004: AAA 
Click on image for an interactive view with Cn3D
ATPase family associated with various cellular activities (AAA)
AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Statistics
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PSSM-Id: 333757
View PSSM: pfam00004
Aligned: 228 rows
Threshold Bit Score: 55.6706
Threshold Setting Gi: 1708857
Created: 13-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2RKO_A        63 ILLYGPPGTGKSYLAKAVATEANST---FFSVSSSDLV-SKWMGESEKLVKQLFAMa-RENK----P-SIIFIDEVDALT 132
gi 81671836  250 VLVSGPAGVGKATLVRAVCDG--RR---LVTLDGPEIGa-lAAGDRVKAVASAVQAv-RHEG------GVLLITDADALL 316
gi 464348    479 LLHSTTNNVGKATMVRFASKYLGIH---LLEIDCLSLTsNSRQLDSTSKIIGYIRAkcENVLpyasP-AVIFLAHLDSIL 554
gi 51704274  473 LLHSAKRGVGKSTVLRSVAAQCGIS---VFEISCFGLI-----GDNEAQTLGTLRA--KLDRaygcSpCVVVLQHLESIA 542
gi 1172019   519 SLLFGTSGSGKSLVISQVAQIV-TNkghFVKLLNCDKI----MSESYNNLRGIFEDi-FSEVswkaP-SLLILEDLDSLI 591
gi 81344765  346 YLISGPIGTGKSFMVSAFAGEIGIP---MVRLCNFQAT---QPGITQSNLEKTLNIl-KALT----P-VAVMVDEADAVF 413
gi 75350255  143 MLILGVPGCGKSLIAKTTSRLWGLP---LLRLDMGRVYdGSMVGRSEANLRNALKTa-ESIS----P-AILFIDELDKAF 213
gi 6136622   278 LLLVGIQGTGKSLTAKSIANEWNLP---LLKLDVGRLF-GGIIGESEARVRQMIQFa-ETIS----P-CILWIDEIDKAF 347
gi 1351773   262 LLLIGIQGTGKSLTAKAIATEWQLP---LLKLDVGRLF-GGIVGESESRLRQMIDVa-ETLS----P-CILWIDEMDKAF 331
gi 81672090  262 LLLAGIQGTGKSLTAKAIAHHWHLP---LLRLDVGRLF-GGLVGESEARTRQMINLa-EALA----P-CVFWIDEIDKAF 331
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
2RKO_A       133 GTRgegese---asrriKTELLVQMNGVGNDs----QGVLVLGATNIPWQLDSAIRr--RFERRIYIPL 192
gi 81671836  317 PAAae----------pvASLILSELRTAVAT-----AGVVLIATSARPDQLDARLRspeLCDRELGLPL 370
gi 464348    555 LDVnanqdp---eaiklQKSINFEMSKLLDDftfkfPGTTFVGSVNNIDNVPSSFRshmRFEILVPVPS 620
gi 51704274  543 KKSdqdgk-----degiVSKLVDVLADYSG------HGVLLAATSNDPDKISEAIRs--RFQFEIEIGV 598
gi 1172019   592 PAEqehsds--sqsrqlSEYFISKLSAQTINr----D-ITILASSKSKESLNSLIFtthLIEHDFQLRA 653
gi 81344765  414 GRRnapag-----esriFAQIAGFMGNTQHR-----GNIIWFLITSRPDLLPIDLKrqgRAEEHLALFY 472
gi 75350255  214 AGGagsgdsdggtssriFGSFLTWMQEKTS-------PVFVMATANRVDRLPGEFLrkgRFDEIFFVDL 275
gi 6136622   348 TGSnfnnds--gttkrvFGTFITWLSEKKS-------PVFVVATANNIDSLPPELLrkgRFDEVFFIGL 407
gi 1351773   332 SNNdsrgds--gtsnrvLATFISWLSEKTK-------PVFVVATANNVDLLPLEIIrkgRFDEIFFLDL 391
gi 81672090  332 GSMdshgdg--gttsrvFGAFITWLAEKTS-------PVFVVATANNVQSLPPELLrkgRFDEIFFVGL 391
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