4QF3


Conserved Protein Domain Family
PHD_BAZ2B
?
cd15630: PHD_BAZ2B 
Click on image for an interactive view with Cn3D
PHD finger found in bromodomain adjacent to zinc finger domain protein 2B (BAZ2B)
BAZ2B, also termed WALp4, is a bromodomain-containing protein whose biological role is still elusive. It shows high sequence similarly with BAZ2A, which is the large subunit of the SNF2h-containing chromatin-remodeling complex NoRC that induces nucleosome sliding in an ATP-and histone H4 tail-dependent fashion. BAZ2B contains a TAM (TIP5/ARBP/MBD) domain, an Apolipophorin-III like domain, a DDT domain, four AT-hooks, BAZ 1 and BAZ 2 motifs, a WAKZ (WSTF/Acf1/KIAA0314/ZK783.4) motif, a plant homeodomain (PHD) finger, and a bromodomain.
Links
?
Statistics
?
PSSM-Id: 277100
Aligned: 4 rows
Threshold Bit Score: 80.4025
Created: 21-Mar-2014
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
 
Zn binding siteH3 histone
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C CClick to see conserved feature residue pattern help
Evidence:
Download Cn3D for Viewing 3D StructureScroll to Sequence Alignment Display
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Feature 1           #  #           #  #    #  #              #  #  
4QF3_A          7 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIA 55   human
AAI42905      197 VYCQICRKGDNEDLLLLCDGCDKGCHTYCHKPKITTIPEGDWYCPDCIS 245  zebrafish
Q9DE13       1896 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIA 1944 chicken
XP_004917752 1905 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPEGDWFCPACIA 1953 western clawed frog

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap