Conserved Protein Domain Family
Csx1_III-U

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cd09723: Csx1_III-U 
CRISPR/Cas system-associated protein Csx1
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as csx13 family
Statistics
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PSSM-Id: 187854
Aligned: 5 rows
Threshold Bit Score: 164.174
Created: 7-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_624181     14 KEVLIATLGSEPQVVTIALDELLkkgyPLSKVIVIYTKSPKVLDALRILNDEFLKEFykmefTKVPVKLYsrdevIEDFL 93  Thermoanaerobac...
YP_001635899   3 KKLLIATLGTAPAVITEAIELLEeqslHPDGVVLLYTEDYDVLSSLELLMKHLPAHCei--sWIVPISVGt----YHDID 76  Chloroflexus au...
YP_502197     10 KTAIIAPIGTSPPVITAGIDALDe---PVSDLVLLATKDEQVLAGCDVVKLGLKSRYp---rIRVHVELLp----FDDIS 79  Methanospirillu...
BAB59248       2 KTLLINPMGTSPMVATEMYEYLKd---EISDVILIYTDNKYVKAGTLAAKASLEDKFh----AHVHLQKLd----FDDIR 70  Thermoplasma vo...
YP_022834      3 KTLLINLMGTTPMVATEMYQYLKnlgeNITDTIIIYTKNSYVMSAAMAASTSLRKKFn----ANVHEIRLn----FDDIL 74  Picrophilus tor...
NP_624181     94 TEESIKALLSTIYKEVRELKQNGf--TIHFLISGGRKIMGIIGMLVAQLLfgdEDRLWYLI 152 Thermoanaerobacter tengcongensis MB4
YP_001635899  77 STKAAVEFMQIACTQLRTYRNNH---RLFVSIAGGRKVMSALLALAVQFYg--AECLFHIW 132 Chloroflexus aurantiacus J-10-fl
YP_502197     80 SDVENLTFMAIAARVIKKERESYgceRILLNVAGGRKNMCITLALLGQLLn--VDGVYHIV 138 Methanospirillum hungatei JF-1
BAB59248      71 SDNDMIKFIKVISETVKKEKYQFgteKIIVNASGGRKIETIILSVYASIFs--FDEVYNII 129 Thermoplasma volcanium GSS1
YP_022834     75 NDDDILTLIGTLADIIKNERERYsveKIILNASGGRKIETIILSIYSSIFm--IDEVYNII 133 Picrophilus torridus DSM 9790
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