Conserved Protein Domain Family
TIGR03985

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TIGR03985: TIGR03985 
CRISPR-associated protein, TIGR03985 family
Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.
Statistics
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PSSM-Id: 274901
Aligned: 10 rows
Threshold Bit Score: 369.766
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01622185  231 QRVFLHLDYILSGEEQDRVDTYQDQLEQLWQQSEGGVVQFDYwISnqqfkRE---RSQItVTVYPVCLHYLRRAKYLSAY 307 Lyngbya sp. PCC...
ZP_01632067  202 QRIFLHLDYILSTETQDQVDNYQEQIEQLWRKIPGGVVQFEYwVT-----AE---NKVP-VTVYPVCLHYLRRAKYLSAY 272 Nodularia spumi...
ZP_03272171  232 RRIFLHFDYILSSEIQEKVDDWQQQIESLWYNHDGGIIQFKTwVA-----RE---NRVAlVTVYPVCLHYARRAKYLSAY 303 Arthrospira max...
ZP_01621554  198 QRFFMEVVYIVSPEKQERVEDWQEHFKLLWQDNPVPPVRLIYqSS-----RV---KKTVcCIVYPVCIYYAQRAVYLCGF 269 Lyngbya sp. PCC...
NP_942366     33 QRFFMHVDYVVA--KRDLDNDWPYRFQQLWQENEFPILRLEYdSV-----SL---HRLVkRITYPVCIYYYQRALYLCAY 102 Synechocystis s...
ZP_05027834  200 QRFFIYLDYVPHPETQDKIEELQEQLQQIWNEIPIPCVLFDYrST-----RLaklNKSVqCVVYPVCIYYVGRTIYLVAW 274 Coleofasciculus...
ZP_05031150  216 QRLFIHHDYVVKEELRETSADLADRLKEIWQETPTPPLQIAYhSA-----SL---NQTKnYTIYPVCLYYYQRAYYLCAF 287 Coleofasciculus...
WP_011432247 217 RRLFVWFEYILSDEQQERVDEYQSQLEALWANPEAGVIGFDY-AT-----RQ---HGIRhVLTYPVCLFYARRAKYLAAF 287 Synechococcus s...
WP_012630706 117 QRLFLHLDF-LSEEIAEQVEDYQAGLEELWQQGDRP-IRFIYqLA-----QA---KRQVkVLVYPVCLHYARRAKYLSAY 186 Cyanothece sp. ...
WP_012599791 206 QRLFIHHNYVVPEGQREMVADKADFLKEIWKKQPTPPLEITYySA-----SL---NKKDnYIVYPVCLYYYQRAYYLCAY 277 Cyanothece sp. ...
ZP_01622185  308 GL--DPK-----G---EFGWHNYRLDRI-SSeRLKVLAWGDPQMPKPLQKLRRSGELPTPEDVRASLEEA-WGFNFYHPR 375 Lyngbya sp. PCC...
ZP_01632067  273 GL--DPH-----N---NIAWHNYRLDRI-ASqKLKVLAWGDPAVPKPLKQMWYTGELPTPDYIQTELDAA-WGFNFYLQR 340 Nodularia spumi...
ZP_03272171  304 GV--DPW-----G---EITWHNYRLDRI-MSpQLRILSWDDPAVPQLLKKQHETGTLPNPGWIEEQLEEA-WGFNFYLPK 371 Arthrospira max...
ZP_01621554  270 GQ--TPT-----A---KGQWYNYRLDKI-I--EIEDLSWTDLDLPQLLFDSHQKRNLPTPDEIQMQMDGVaWGFDFYLEH 336 Lyngbya sp. PCC...
NP_942366    103 GQ--DPKd---rN---KLDWYNYRLDRI-K--AMANLDWSDPEIPLPLQEQYQQQNLFTADYIDTQLSRG-FGFDFYKPL 170 Synechocystis s...
ZP_05027834  275 GR--NPI-----G---QVNWYNYRLDKI-QG-KLISLTWTDKRIPEKLIQRYHENHLFTPDYVEKELDEA-LGFDFYETA 341 Coleofasciculus...
ZP_05031150  288 GQ--RPQktatkA---PVGWYNYRLERI-S--KYQKLPWDTAHLPFSKSDIINHPENYAPAYIQQELDAA-YGFDFYEKS 358 Coleofasciculus...
WP_011432247 288 GQlpTPE-----G---SLGWHNFRLDRI-QSeRLAVIPWDAPSIPPELAIRKRQKKLPSPEEVQAAWEEA-WGSDFYLPK 357 Synechococcus s...
WP_012630706 187 GI--DPY-----G---QENWHNYRLDRIrSS-QLDVLDWQHPDIPDFLLKLKQQNQLPTPEEVREKLEEA-WGLDFYRPA 254 Cyanothece sp. ...
WP_012599791 278 GQ--APE-----NfkrHEQWYNYRLERI-L--DLTEISWQGDKLPLTKDQIINDEKSYNPDYIQEQLKKA-YGFDFYQPI 346 Cyanothece sp. ...
ZP_01622185  376 ELLILRFPPDFARWYVDETVRHSTFKPIAYSRLIPLIn-ARISDLKTRQELIDLIEK------SSPTDR-----YYQAWI 443 Lyngbya sp. PCC...
ZP_01632067  341 EFLILRFPPAFASRYVDNTFRHPSFCAIPYENLPKQI--VQNIPETQQQKVLEILQQ------KPDSDA-----YYIGWI 407 Nodularia spumi...
ZP_03272171  372 ALLIMRFPVDFASNYVDDTVRHSTFQKIPYSELFSSVe-TQINNREERQLIQKILRQ------RSPDDA-----YYQAWV 439 Arthrospira max...
ZP_01621554  337 QVMLLRFDRQFSDYYIEGTFRHQTFQSISYEDAEQLI--IKQGK-TEKQQLLKVLHS------RSKTDA-----YYRLDY 402 Lyngbya sp. PCC...
NP_942366    171 KTMVLRFNQDFSERYIDESFRHETFKKFDTVQQLSTWlgQQQLQPTEKEQLQRAIKQwqaqgkQEPTHS-----YFRMDY 245 Synechocystis s...
ZP_05027834  342 SLMLLRFEGDYHQRYIKGTFRHKTFKQVSYQEAVHLI--QQQAQSPEEEKLLEIVRS------RPPQDA-----YYTLCY 408 Coleofasciculus...
ZP_05031150  359 DVTLLRFDADFAQRYIDNSFRHPTFEKLDSSEAAQAL--IKDLKLPNTQKLLAHIHA------HPDAA------YYILRY 424 Coleofasciculus...
WP_011432247 358 ALLILRFSPEFARRYVESTVRHPTFQPIAYERIPALVq-QAVADAREREQILNIVRQ------RPTSDR-----YFRAWV 425 Synechococcus s...
WP_012630706 255 QLLILRFPADFARWYVTEKFNRLKLEKLSYPQLVKRIr-KEILDSQEQQTLLELVHQ------RQSSDSnnnyvYFCAQV 327 Cyanothece sp. ...
WP_012599791 347 DQMLLKFEPDFARRYINNSFRHQTFEKIEDIEEIISF--IKQAKTAIQEQLIAKVKN------FPHYD------YYILSY 412 Cyanothece sp. ...
ZP_01622185  444 RLGDINVLMRLRQWRPNGEVIAPLSVRQQLIAEASVELSNYH 485 Lyngbya sp. PCC 8106
ZP_01632067  408 RTGDINVLMRLRDWRPNGEVIAPLSIRQQLRKEAIQELSNYQ 449 Nodularia spumigena CCY9414
ZP_03272171  440 RVGDINIVMRLRDWRPQGEIIAPVVLRQQMWEEVEAERLHYG 481 Arthrospira maxima CS-328
ZP_01621554  403 REGDTNVELRLRSWRPKVEVILPLKLRQKIAQEVQQEAQFYS 444 Lyngbya sp. PCC 8106
NP_942366    246 RDQDNNVIMRLRAWGPNVEVLFPLDLRQRMASDVQAMAALYS 287 Synechocystis sp. PCC 6803
ZP_05027834  409 RENDPNVKQRLGAWRDHVEVLYPWKMRQYFAEYIHRLWQLYK 450 Coleofasciculus chthonoplastes PCC 7420
ZP_05031150  425 RQQDNTVIMRLRAWGPKVEVMFPNELRQRMRQDIEQTWQFYQ 466 Coleofasciculus chthonoplastes PCC 7420
WP_011432247 426 RVGDTNFTMRLRDWRPNGEVIAPLAYREQMAREAQAELQFYR 467 Synechococcus sp. JA-2-3B'a(2-13)
WP_012630706 328 RVGDINVTMRLRDWRPQGEVIAPLQLREQMKREALTELAHYQ 369 Cyanothece sp. PCC 7425
WP_012599791 413 RKNDNNVIMRLRSWSPNVEVLLPTELRQQIREDFLLTWQYYQ 454 Cyanothece sp. PCC 7424
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