2E3U,1TUA


Conserved Protein Domain Family
arCOG04150

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TIGR03665: arCOG04150 
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arCOG04150 universal archaeal KH domain protein
This family of proteins is universal among the 41 archaeal genomes analyzed, and is not observed outside of the archaea. The proteins contain a single KH domain (pfam00013) which is likely to confer the ability to bind RNA.
Statistics
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PSSM-Id: 274711
Aligned: 35 rows
Threshold Bit Score: 162.734
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2E3U_A        37 YVKIPKDRIAVLIGKKGQTKKEIEKRTKTKITIDSEtGEVWItstK-ETEDPLAVWKARDIVLAIGRGFSPERAFRLLNE 115 Pyrococcus hori...
WP_011752183  15 pVPVEQSRIGYIIGKDGSNKRRLEETFNVKLDVDSAtGVVYVe--PgEGATPYNVFRAKKALEAISIGFTVDDALLLGDD 92  Thermofilum pen...
WP_010978489   2 YITVPDDKINLV----KSILGRLEEISNTKIEFDEKtKSIRVi--P-KDNNAYEAMKVVSVIKAIGVGFDVDEAMKLMRD 74  Sulfolobus toko...
WP_011277830   2 YVTVPDERLDLI----KTLSKRIEEISNTTINFDEVtKQIRVi--P-KDNNSYNAMKVISVINALGFGFEPNDAMRLMSD 74  Sulfolobus acid...
WP_012020615   2 FVSVPDEKLDLV----KSLLDDLSRMGGVEIIYDEKvKNFIVd--P-KNQNPYQALKVVSVIRAIGLGVSVSDALKLMGE 74  Metallosphaera ...
WP_009989467   5 FITVEDEKLEVV----KKVIGKLEQFTDTKIIYDERtKTFNIl--P-KGQNQYETLKAVSVIRAIGLGFDEQSAFRLLSD 77  Sulfolobus solf...
WP_012186031  11 EIPLEKAKTLVT----EEVKNSIEVNLKVQVEVKDDs-VVLTp--M-QDANPDSVIKARQIIQALALGFSRDDALELLND 82  Caldivirga maqu...
WP_011153028   1 MFSFEIEKKPNII----RNKKKLEERLNIELEEKENsYIVKA-------NDGLTLNKAIKIIDALNAGFG-EEAYKLLDD 68  Nanoarchaeum eq...
WP_011822547   9 YAKVPPDRIGVLIGEGGKVKIEVMKRTRTKITVDSTtGMVIIepeS-PDVPPYMVMKAQEFVRAIAYGFSPERAMRVLDD 87  Hyperthermus bu...
WP_010865950  11 YVKVKPERLGAVIGPRGEVKAEIMRRTGTVITVDTEnSMVIVepeA-EGIPPVNLMKAAEVVKAISLGFPPEKAFRLLEE 89  Aeropyrum pernix
2E3U_A       116 GEYLEIINLTD-IiiGNEK-NALPRVRGRIIGRKGRTRQIIEEMSGASVSVYG--KTVAIIGNPIQIEIAKTAIEKLARG 191 Pyrococcus hori...
WP_011752183  93 AYDLEVIDLSE-V--SKRR-EDLSRIKARIIGTEGRFKKTLEDMTGARIVIGE--KAVGIIGDFEQNKVVKEALERLIAG 166 Thermofilum pen...
WP_010978489  75 DYVLDIIDLKD-S--TNGP-EDMKRIKGRIIGEKGKTKKIIQEYTGVNIIITD--HYVGILGTIEQADIAKRAIEMLIKG 148 Sulfolobus toko...
WP_011277830  75 DYGLEIINLKE-F--TNSV-NSLRRIKGRVIGEKGKTKRTIEEYTGVIVLVKD--HEIGLLGNIEQLSIAKRAIELLIEG 148 Sulfolobus acid...
WP_012020615  75 EVMMDVIDLKE-I--SNSR-DNMTRVKGRIIGEGGKTKKIIQEYTGVSVVISG--HYITLLGNYEQIPIAKKALELLVKG 148 Metallosphaera ...
WP_009989467  78 EYTLDVIDLKAlI--GSNP-DTIRRVKGRIIGENGKTKRIIQEYTGVDISIYG--HYIGVLGPYDQVQIAKKAIELLIDG 152 Sulfolobus solf...
WP_012186031  83 DKYLDVVDLSD-Yi-GKDKeNHLSRIKAIIIGEGGKVKRNLEELTETKIAVKD--KAVGIIGNYDNVRAVRDAIVMLING 158 Caldivirga maqu...
WP_011153028  69 NYDFMVIPIKR-A--TKND-KERKRILARLIGTKGKAKKNISNLTGVSVIIDDkkKEAYLLGKIEDLIIARESINRIIEG 144 Nanoarchaeum eq...
WP_011822547  88 DQVLVVIDLKQ-Yv-GDSP-NHLQRVKGRIIGEKGRARKTIEEMTGTYISIYD--NYVAIIGDFETANIAKQAIEMLIQG 162 Hyperthermus bu...
WP_010865950  90 DQILVVVDLKQ-Vv-GDSQ-NHLKRIKGRIIGEGGRARRTIEEMTDTYINVGE--YEVAIIGDYERAMAAKQAIEMLAEG 164 Aeropyrum pernix
2E3U_A       192 SPHGSVYRYLERRKKDLELEG 212 Pyrococcus horikoshii OT3
WP_011752183 167 QSHQSVMKFLERMSFELKRRR 187 Thermofilum pendens
WP_010978489 149 KEHSTVYKYLDKAERELSLFN 169 Sulfolobus tokodaii
WP_011277830 149 KEHNTVYKYLDKAERYAMLSN 169 Sulfolobus acidocaldarius
WP_012020615 149 REHSTVYRYLDRAEQQLIRYR 169 Metallosphaera sedula
WP_009989467 153 KEHSSVYKFLDKAEKDLIIYK 173 Sulfolobus solfataricus
WP_012186031 159 RQHSTVYRWLQRWKRDLNLRR 179 Caldivirga maquilingensis
WP_011153028 145 QPHGKVYSFLESNRRLKKLRD 165 Nanoarchaeum equitans
WP_011822547 163 RQHSTVYRFLERTMFRLRRAR 183 Hyperthermus butylicus
WP_010865950 165 RMHSTVYRHLERIMREIKRRE 185 Aeropyrum pernix
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