Conserved Protein Domain Family
VirB5
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TIGR02791: VirB5 
P-type DNA transfer protein VirB5
The VirB5 protein is involved in the type IV DNA secretion systems typified by the Agrobacterium Ti plasmid vir system where it interacts with several other proteins essential for proper pilus formation. VirB5 is homologous to the IncN (N-type) conjugation system protein TraC as well as the P-type protein TrbJ and the F-type protein TraE.
Links
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Statistics
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PSSM-Id: 274302
Aligned: 5 rows
Threshold Bit Score: 212.826
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
CAE30991          1 MKKLSASCIM-----AVGIAASSAAFAQIPVTDGASI----AKSVENQIETMAKWKMQYDQMVSQIDQMKQQYAAVTGAR 71  Bordetella b...
tigr:PSPPHB0029   1 MKKHAIACALsalmlTAALPAAHAAVPGVPVLDPSTLlalkVNALAQAKQAMDALSTAKEAISETAKQYNHYKGIITGND 80  Pseudomonas ...
AAL45856          4 YRLHGVLLSA-----VLMLAAEGVSGQGIPVNDQA--------AIAKQIESIAQLKSQLDALNEQIGQARQLYGSLNKLT 70  Agrobacteriu...
AAF85577          4 FKKPFGPFAL-----MIGLSVGNLANAGMPVIDWA--------NLEQAQLQVEAWKKQYEQMTSQIEQVKQQYESTNGIR 70  Xylella fast...
tigr:BRA0065      1 MKKIILSFAF-------ALTVTSTAHAQLPVTDAGSI----AQNLANHLEQMVKFAQQIEQLKQQFEEQKMQFDALTGYR 69  Brucella sui...

CAE30991         72 GMGEL---FNNPQLRDYLAqdwqgvydsvksggyaglSGRAESIYENNKVYD-ACTGFASNEQRANCEAQAVKGAQ-DKA 146 Bordetella b...
tigr:PSPPHB0029  81 MLGGF---LNDPALNRVMP------------------MGDWAEVYSTGRDIVsLRDRYGLTSDNASVQAKFDQMMAaADA 139 Pseudomonas ...
AAL45856         71 DMADVaevLNDPAIRKALPfdfaaiegl-lkgngtgvFGDSASRFLEGN----STYRTDADDFYARELSRLQNKNAgQMS 145 Agrobacteriu...
AAF85577         71 NMGSL---VNNPAARQYLPadyat--------ilsqgVGNWAAIRSAAEKFDvSMTSLAANSDTAQAFQQAAKQAAlNRA 139 Xylella fast...
tigr:BRA0065     70 GLGDI---LRDPTLRSYLPhnwrdlyeavmsggylaaAGETANLLRKSQVYD-PCASISDKDQRIACEAKVVKPVQ-DKV 144 Brucella sui...

CAE30991        147 FaLDAYDAAKNRLSQIDQLMQQINQTQDPKAIAELQGRIAVEQAMIQNEQTKLQMYQMVAAAEDRLQQQRRKE 219 Bordetella bronchis...
tigr:PSPPHB0029 140 L-ERNYKASTERVKNAEMLRSRLNEVTTPQQKQDLQLRYQQELIEQQNQQMRLANMQMLQQQQEKMENEKRAQ 211 Pseudomonas syringa...
AAL45856        146 VgEQIYDAGTKRIDGIDQLRGKISTAGDAKEIADLQARLQVEQAFLQTDVLRMEGLRMVQEAQNQVDEQRKAE 218 Agrobacterium tumef...
AAF85577        140 SaEMAYSTASQRFSDIQVLLDKINNAPDAKDIADLQARIQVEQVMMQNEANKLQALQLLVNAQRDLQIQQNKE 212 Xylella fastidiosa ...
tigr:BRA0065    145 MtSKAYDATDKRLQEIESLMQEINKTGDPKAIAELQGRIESENAMIQNEDTRLHLYQQMAEAQDKLLDERQHE 217 Brucella suis 1330
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