4M1B


Conserved Protein Domain Family
spore_ybaN_pdaB

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TIGR02764: spore_ybaN_pdaB 
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polysaccharide deacetylase family sporulation protein PdaB
This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown. [Cellular processes, Sporulation and germination]
Statistics
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PSSM-Id: 274287
Aligned: 13 rows
Threshold Bit Score: 269.977
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4M1B_A          52 GDTSKKQVAFTFDISWG-DKKAIPILDTLKERDIKnATFFLSAAWAERHPDVVER----IIKDGHEIGSMGYNYTSYTSL 126 Bacillus anth...
AAO36776        53 VDTKEKKAAITFDVNWG-NDNTKSILETLDEYEIK-ATFFLIGNWIDDYPEQAKE----IYKRGHEIGNHSNAHPDMAKI 126 Clostridium t...
AAK80338        51 VDTKDKKIAITFDSNWG-NDNTMKILDVLDKYNAK-ATFFLIGRWVEDYPNETKE----IYRRGNEIGNHSYKHLDMTTM 124 Clostridium a...
BAB81617        43 VDREDKKISLTFDVNWAeNDYLCEILDLLDENNIK-ATFFIMGKWV-IYPEGNREklveIHKRGHEIGNHSYVHPDFKNI 120 Clostridium p...
P50865          52 GETDSKDISLTFDISWG-DERAEPILNTLKANGIKnATFFLSASWAERHPDTVAR----IVKDGHQIGSMGYAYKNYANL 126 Bacillus subt...
BAC12155        50 GNADEPDIAITFNISWG-EERVEEILKQLENEDVQ-ATFFISGEWAERHPDLLKA----ISDGEHEIGMLGYRYKSYLDQ 123 Oceanobacillu...
BAB03962        51 AETDEKVAALTFNISWG-EQRVKPIIDVLQSKKVEeATFFISASWAERHPELVEL----IQEAGYHIGSHGYQYKNYTTW 125 Bacillus halo...
BAD62745        51 AENADHKIALTFNISWG-EQNVRPIVNILKENDVEhATFFVSASWAETYPELVKE----IADSGFHIGSHGYRYKNYTAL 125 Bacillus clau...
tigr:CHY_1591   50 VETSKKVVALTFDLSWG-TKTYKPILNTLKKENIK-ATFFLSGPWAKQHPEIVRE----IVKDGHEIGSHGHRHVNYTGL 123 Carboxydother...
BAD39998        58 ARTEDKVVALTFDISWG-NQMAPKVLEVLRNEKVP-ATFFLSGPWAKNHAELVKQ----IQADGHEIESHGHAHVDLNTL 131 Symbiobacteri...
AAS42542        48 VPNNEKVIAITFDDGPD-PTYTTQVLHLLRQYKAE-ATFFMIGFRVQRNPYLVKQ----VLKEGHEIGNHTMNHLYANSS 121 Bacillus cere...
AAM24122       132 NPSSGKEVALTFDDGPF-PIYTEKYVDILKSMDVK-ATFFVIGKHAEKHPELLKY----IVENGNEIGLHSYSHFNMKKL 205 Caldanaerobac...
tigr:GBAA_0150  52 GDTSKKQVAFTFDISWG-DKKAIPILDTLKERDIKnATFFLSAAWAERHPDVVER----IIKDGHEIGSMGYNYTSYTSL 126 Bacillus anth...
4M1B_A         127 ETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGDFNKATLKIAESLGYTVVHWS--NNSNDWKNPGVNKIVSTVSNNLKGG 204 Bacillus anth...
AAO36776       127 PIEKIKKDINIADGKIFNLIGSNSKLFRFPSGSYNDNAVKAVEEMGYYCIQWD--VDSIDWKEEGEEEEYSRVMKKTKPG 204 Clostridium t...
AAK80338       125 SKQNIKKDIAMADEKIYSVTGTKTKVFRCPSGSYDSSTIEVAESTGHKCIQWN--IDSIDWKEQGQNVEYDRVIKNIKPG 202 Clostridium a...
BAB81617       121 GKERIIEEVKKTEEIIEKEVGVKTNLFRFPSGSYSQESLSAIEGLEYKSIQWD--VDSVDWKGESKEREYKKVIDNVKSG 198 Clostridium p...
P50865         127 ESSEIKKDMNRAQTAFEKLGVKDIQLLRPPTGQFNKNVLKVAKQYNYTVVHYS--VNSQDWTNPGVEKIIDNVTKQVSGG 204 Bacillus subt...
BAC12155       124 EVEQVKKDLLYAQEAFEKLGYENVNLLRTPHGHFNEEIIELAESLGFHVVHWN--VNPNDWENPGTEVIVDYIMKETDNG 201 Oceanobacillu...
BAB03962       126 EDEKIRKDLRQSQQVISSITGEKPTLLRPPNGDFDKRVLNLAESYDYTVVHWS--INSRDYENPGVDAIVRQVVDHISPG 203 Bacillus halo...
BAD62745       126 DDEQVIKDMRRSKQVLQELTGETPTLLRPPNGAFTTRTLALAEQQGFDIVHWS--VNSYDYKNPGTAQIIDNVLNATHSG 203 Bacillus clau...
tigr:CHY_1591  124 SPEEIKKEVVLAHEAIKEASNKTPTIIRLPNGDYNKTVIKTLREIGYTAIQWS--VDSLDWKNPGEEIILKRVLDSIHPG 201 Carboxydother...
BAD39998       132 GREGAARNIAAAHAILKELTGRDPTYIRPPNGAFNEASVQAAKDLGYATVIWS--VDSLDWKNPGVDRIVNRTVRLAHPG 209 Symbiobacteri...
AAS42542       122 SDEKLKKDILDGKKYFEKWV-KEPLLFRPPGGYINDAVFKTAKEAGYQTVLWSwhQDPRDWANPGVESIVNHVVKNAKSG 200 Bacillus cere...
AAM24122       206 KPEKMVEELYKTQQIIVEATGIKPTLFRPPFGAYNSTLIEISNALGLKVVLWN--VDPDDWRNPSVESVVNRVLSHTRDG 283 Caldanaerobac...
tigr:GBAA_0150 127 ETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGDFNKATLKIAESLGYTVVHWS--NNSNDWKNPGVNKIVSTVSNNLKGG 204 Bacillus anth...
4M1B_A         205 DIVLLHa-sDSALQTNKALPLLLQKLKSDGYEQISVSQLI 243 Bacillus anthracis str. A0248
AAO36776       205 SIILFH---SDSKYTPKTLSRIIKDLKEKGYEFVKVGELI 241 Clostridium tetani E88
AAK80338       203 SIILFH---NNAKYTPKNLDRMLNKLKSDGYKFVRISDLI 239 Clostridium acetobutylicum ATCC 824
BAB81617       199 SILLYH---NNGKYTVENLKEIIPKLKSEGYEFVKISDII 235 Clostridium perfringens str. 13
P50865         205 DIILLHa-sDSAKQTEEALPDIIHQLKEKGLKNVTVGDLI 243 Bacillus subtilis subsp. subtilis str. 168
BAC12155       202 DIVLLHa-sDSAKQTAGALETILPGLKNKGYEPVTISEII 240 Oceanobacillus iheyensis HTE831
BAB03962       204 DIVLMHa-sDSAKQTHKALPIIIDQLKGKGYHFRSIEELM 242 Bacillus halodurans C-125
BAD62745       204 DVLMFHa-sDTVKQTGAALPTILKELEKRDYELATIEELM 242 Bacillus clausii KSM-K16
tigr:CHY_1591  202 AIILMHa-sDTCKQTGQVLPEIIKELKKQGYTFITISRLL 240 Carboxydothermus hydrogenoformans Z-2901
BAD39998       210 AIILMHa-sDSCKQTDQALPAIIRSLREQGYRFLLLDDLI 248 Symbiobacterium thermophilum IAM 14863
AAS42542       201 DIVLLHdggNDRSQTVAALAKILPELQKQGYRFVKVSELL 240 Bacillus cereus ATCC 10987
AAM24122       284 SIILMH---EGKPSTLAALPQIIKKLKEEGYKFVTVSELL 320 Caldanaerobacter subterraneus subsp. tengcongensis MB4
tigr:GBAA_0150 205 DIVLLHa-sDSALQTNKALPLLLQKLKSDGYEQISVSQLI 243 Bacillus anthracis str. 'Ames Ancestor'
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