3IDV


Conserved Protein Domain Family
pdi_dom

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TIGR01126: pdi_dom 
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protein disulfide-isomerase domain
This model describes a domain of eukaryotic protein disulfide isomerases, generally found in two copies. The high cutoff for total score reflects the expectation of finding both copies. The domain is similar to thioredoxin but the redox-active disulfide region motif is APWCGHCK. [Protein fate, Protein folding and stabilization]
Statistics
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PSSM-Id: 273454
View PSSM: TIGR01126
Aligned: 20 rows
Threshold Bit Score: 150.131
Threshold Setting Gi: 4581959
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3IDV_A      135 LTKENFDEVVN-DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRsP-PIPLAKVDATAE--TDLAKRFDVSGYPTLKI 210
gi 1848212   29 LTEENFEKEIG-QDRAALVEFYAPWCGHCKKLAPEYEKLGASFRKA-Ks-ILIGKVDCDEH--KSVCSKYGVQGYPTIQW 103
gi 1848212  147 LSPDNFDEIVLdETKDVLVEFYAPWCGHCKSLAPIYEKVATSFK-Q-EeDVVIANLDADKH--RDLGEKYGVSGFPTLKF 222
gi 30316385  25 LIPSNFDDVVLkSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYA-KdKVQIAKVDADAE--RALGKRFGVQGFPTLKF 101
gi 2501210   24 LVPKNFDDVVLkSGKPALVEFFAPWCGHCKNLAPVYEELGQAFAHA-SdKVTVGKVDADEH--RDLGRKFGVQGFPTLKW 100
gi 30316385 146 LNDATIKGAIG-GDKNVLVAFTAPWCGHCKNLAPTWEKLAATFASD-Pe-ITIAKVDADAPtgKKSAAEYGVSGFPTIKF 222
gi 2501210  145 LNDATFKGAVG-GDNDVLVAFTAPWCGHCKNLAPTWEALANDFVLE-Pn-VVIAKVDADAEngKATAREQGVSGYPTIKF 221
gi 2702281  167 LNASNFDDLVIeSNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQG----KVKLGHVNCDVE--QSIMSRFKVQGFPTILV 240
gi 1352731  360 LVADNFDDIVMdETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDD-S-NVVVAKIDATEN--DIS---VSISGFPTIMF 432
gi 119530   530 VVGKTFDSIVMdPKKDVLIEFYAPWCGHCKQLEPVYNSLAKKYKGQ-K-GLVIAKMDATAN--DVPSDRYKVEGFPTIYF 605
                        90       100       110
                ....*....|....*....|....*....|
3IDV_A      211 FRKGR---PYDYNG-PREKYGIVDYMIEQS 236
gi 1848212  104 FPKGSl-ePKKYEG-GRTAEALAEFVNSEG 131
gi 1848212  223 FPKGNk-aGEHYDG-GRHLYDFVNFINEKS 250
gi 30316385 102 FDGKSe-qPVDYKG-GRDLDSLSNFIAEKT 129
gi 2501210  101 FDGKSd-ePEDYKG-GRDLESLSSFISEKT 128
gi 30316385 223 FPKGSt-tPEDYNG-GRSEADLVKFLNEKA 250
gi 2501210  222 FPKGSt-eSVPYEG-ARSEQAFIDFLNEKT 249
gi 2702281  241 FGPDKs-sPYPYEG-ARSASAIESFASELV 268
gi 1352731  433 FKANDkvnPVRYEG-DRTLEDLSAFIDKHA 461
gi 119530   606 APSGDkknPVKFEGgDRDLEHLSKFIEEHA 635
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