Conserved Protein Domain Family
flhF

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PRK05703: flhF 
flagellar biosynthesis regulator FlhF; Validated
Statistics
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PSSM-Id: 235570
View PSSM: PRK05703
Aligned: 138 rows
Threshold Bit Score: 321.843
Threshold Setting Gi: 222100642
Created: 9-Dec-2010
Updated: 17-Jan-2013
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161936323   1 MKIKRFFAKDMRTALSEVKEELGADAVIMSNKKVTGG----------VEIVAAVDTDIANeppkasqntrnalanrlgqa 70
gi 258514020   1 MKVKKYLVNDMKEALYLIKKDLGPEAMIINSRKVRRKgllgffikrkLEVTAAVDEPVVNe------------------- 61
gi 134300230   1 MKIKKYTVNEMQEAIQLIKQDLGSEAVIVSSQRVKGKgwlgw-lkksLEVTAVLDDAPVQ-------------------- 59
gi 157363485   1 MKIKKYMVNDIREALDQIKKDLGEDAVILSTRSIKKGgffgigsrrfLEVTAVAEEKNEQ-------------------- 60
gi 217077811   1 MIVKKYVVKDIKEALEKIKIELGKDAVILGTRKIKKGgflgigaktfLEVTAAVEEKEVE-------------------- 60
gi 150021315   1 MIVKKYLVKDIKEALEKIKIELGKDAVILGTRKIKKGgflgigaktfLEVTAAVEENEVK-------------------- 60
gi 154249074   1 MIVKKYVVTDIKEAFEKIRVELGKDAVILSTRKIKKGgflgigaktyIEVTAATSDKKEQ-------------------- 60
gi 83589643    1 MKIKRYLARDMQEAYLAIRRDLGPDAVIVATRRVRQPglkglflpprLEVTAALDTTSGA-------------------- 60
gi 147678406   1 ----------MQEAIRLIKQDLGPEAVIVSSYKVPAKgligffsprlLEVTAVLDESPKL-------------------- 50
gi 169831893   1 MRIKRYLARDMSEAVGLIKADLGPDAVIISSRKVRSKglfgffrprrLEVTAALDEKETV-------------------- 60
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161936323  71 krklaedqvqikqsaasrfasvlqnytgdkpkdsspeadslsallnrqskqhGEPSVRHSYDRSNNDNRGGRSPSALQAQ 150
gi 258514020  62 ----------------------------------------------------KRQELSQAVGAGPVSSPAPVERVMRGEA 89
gi 134300230  60 ----------------------------------------------------------------PAKTLLTGGVPIEKSL 75
gi 157363485  61 ---------------------------------------------------------------HANKDIYRFEEILVKNR 77
gi 217077811  61 -----------------------------------------------------------KQKQNENKQIYQLQELLSKNS 81
gi 150021315  61 -----------------------------------------------------------QNNEMKTQQIYQLQEILSKNS 81
gi 154249074  61 -------------------------------------------------------------QSEEKGQIYKLQEILSKSK 79
gi 83589643   61 ----------------------------------------------------AAPAVPVKAGQPPGPGVLPGQDMTAPLS 88
gi 147678406  51 -------------------------------------------------------------------------------D 51
gi 169831893  61 -------------------------------------------------------------PLGPKGDYPPWPEPGAAAV 79
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161936323 151 SHNKLPQG--------QGNYRNMGDGRRAASDRFSGDHSDNRQSGFsargmnsaqqskanpldfgdhrrpyparseqpqn 222
gi 258514020  90 AARTRAQLayniagttVGKARESGFSTGGTINSPGSSSVSSLSLRD---------------------------------- 135
gi 134300230  76 ETKPPQSQyldyrv------------------------------------------------------------------ 89
gi 157363485  78 EKRQEEEI------------------------------------------------------------------------ 85
gi 217077811  82 KTTTSSSE------------------------------------------------------------------------ 89
gi 150021315  82 QKRSTDEL------------------------------------------------------------------------ 89
gi 154249074  80 TNNPQNVE------------------------------------------------------------------------ 87
gi 83589643   89 STVSPGVGv----------------------------------------------------------------------- 97
gi 147678406  52 IRVDCPPA--------QMAVGEARLAESLIGPGENRQKVLYEGRRAdrsaggfypagn---------------------- 101
gi 169831893  80 VRTAHESA--------VPTGGSGp-------------------------------------------------------- 95
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161936323 223 gprqreqasefgrgsraessfshnssrlnqsrldpsrydaKSPRSNDEMETMRSEMSSIRSLLEHQLSGLm--------- 293
gi 258514020 136 ----------------------------------------KNIQPVNSESKLHNELSEVKLLLNRIMRDK---------- 165
gi 134300230  90 -----------------------------------arsqkMQDPVHAQVQRIKLGETRFQPLLDEVLLQMaegevk---- 130
gi 157363485  86 -------------------------------------------------RELKQMLQEMKSMMFSKQVDL---------- 106
gi 217077811  90 ------------------------------------------------LSEIKKMMYELKTMVSSQKSDN---------- 111
gi 150021315  90 -------------------------------------------------NEIKKMMYELKTMVSMQKSDN---------- 110
gi 154249074  88 -----------------------------------------------EISEIKKMMVELKSMISSQRTNE---------- 110
gi 83589643   98 ----------------------------------------GDRGMGPGLEGLRRELADIKATLMRLTHPE---------- 127
gi 147678406 102 -----------------------------grsselikinlPEAGKPPALCREGWQGNGSGNLFENMVKKQ---------- 142
gi 169831893  96 ----------------------------------------TIVPVPEPVSELHRELTEIKGMLSRFSSGVqaghpevpar 135
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161936323 294 --------wQEVERREPMRAMMIKRLEKMGLSSELADQFASyIPEDVPAHE---------AWPVLLDLLADQIITTNDCI 356
gi 258514020 166 ----------DTSHEDIFISKWRQILLDTDMDEVLVERLLEdANDRYDSGRsdr---demLKVNLINKITGLIEPAYQDI 232
gi 134300230 131 ---tqakliEPAVNGDQVYQRWLEKLLEMDIQPAVAKTLLDaALLKIKDSEal-----dmVELVLINQTAELLKAPYKGE 202
gi 157363485 107 ---------------PQNMQKLLKALQIHEVDPVVSNKIMEyIHIAYGDVPvd-----dnFKQRLSEHIVPFVKTEVPIL 166
gi 217077811 112 --------------EPEWSKDLRKSLSFHDVNFEIIEKIIEyIKIKYGSIDfnd----enSRFVLSEVFLPFIKTEVPDL 173
gi 150021315 111 --------------EPEWIRDLRKALNFHDVNQEIIEKVIEyIRIKYGKIDfed----enTRFVLSEIFLPFIKTDNPDI 172
gi 154249074 111 ---------------PQWVESFRKALKKQDIDDEISDKLIEySKMKYQELDfsn----enTRLILSEMFLPFINTSVPDL 171
gi 83589643  128 ------------GDGAGGNAAWRQALLDQELAPELAADLVAgLDMTAGPEV---------IGAVIRNRLAERLAGQVLAE 186
gi 147678406 143 ---------IAAGLKEDPVLKWRKMLLDMEVQENIVEHLLSvAGSGGNLSGdgsrrfffnLQKRVIDLLETAYRPGENAR 213
gi 169831893 136 gtrvsgsgqRVGEDGEAFYGEWQRLLEEVEILPDLTTHLIAeLRRQVDPLHiqr---ndlARICLQNEIVRLVEPAYAQA 212
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161936323 357 -LETGGVVALLGPTGVGKTTTIAKLAARAAmDFGADEIALVTTDTYRIGA-HEQLATYGRILGCPVRVAKDAEELADILH 434
gi 258514020 233 sFGK--VYAFIGPTGVGKTTTLAKLAAQFS-LFYQKDIALITIDTYRIGA-VEQLKTYGEIIGVSLDVVMTPEDLHRVIM 308
gi 134300230 203 kNSR--FMTFIGQPGVGKTTTLTKLATKYQ-LLEKKNVALITLYTYRYGS-TDHLKIYGDNLDLPVEVVMTPTELSQAIE 278
gi 157363485 167 ----EKSVLFVGPTGVGKTTTLAKIAAKLK-LIHKKQVAILTLDTYRIAA-TEQLKTYAAIMDIPMRVAYTPKEAKLELD 240
gi 217077811 174 ----TGKVMFVGPTGVGKTTTLAKLAAKMS-INNHKKVGILTLDTYRIAA-TEQLKTYATLMDIPMRVAYTPKEAKIELE 247
gi 150021315 173 ----TGKVMFVGPTGVGKTTTLAKLAAKMS-INEHKKVGILTLDTYRIAA-TEQLKTYATLMDIPMRVAYTPKEAKIELE 246
gi 154249074 172 ----KGRVLFAGPTGVGKTTTLAKLAAKLK-LSEKKRVAVITLDTYRIAA-VDQLKTYAMLLDVPIRVAYTPKEAKLEVE 245
gi 83589643  187 sGQR--VQAFVGPTGVGKTTTLAKVAARHS-LYLEQKVGLITLDTYRIGA-VDQLRTYAEIMGLPLEVAMTPREFREALG 262
gi 147678406 214 ------ILTFVGPAGMGKTTTLTKLAARFS-LYDRKKIAVIAVNTYRIGGeAERLLAYGNLLGIPVEVVMTPLELAKVLE 286
gi 169831893 213 aQKR--IMAFVGPTGVGKTTTLAKMAAQYT-LFHGKSCAIITIDTYRIGA-VEQLNIYAEIMGVPLEIAMSPQDFAKAVQ 288
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161936323 435 QLRHRRLVLLDTAGMGQRDIRLSEQLDTLMQ---NSG--AHIRSFLVLPSTAQRRVLQETIEHFRRIPLSGCVLTKLDES 509
gi 258514020 309 RHKDKDIILIDTAGHPSNNAVYVQELKGFLD-----VisLPLDIFLVLSATTKNKDMFKIIDEFGRKDISKIIFTKIDET 383
gi 134300230 279 KHSNKDYIFIDTVGRSSNNTGQVLELKSFLEvipSEN-----DIFLVLNASTKDRDLFRTIHDFRITSFNKFIFTKVDET 353
gi 157363485 241 AMHDFDVILIDTAGRSQNNDIQMSELRALVEt------iTPSVCFLVVGMNCKYSDLKDIVKKFDVAKYTHTILTKMDET 314
gi 217077811 248 AMADFDLVFIDTAGRSQKNDLQMNEIKAMSEi------iNPDFIFLVVGMQYRSNDVELITKKFSSVSPTHVILTKMDET 321
gi 150021315 247 AMADFEVVFIDTAGRSQKNELQMNEIKAMAEi------iSPDYKFLVVGMQYRSSDLELISKKFNDVSPTHIILTKMDET 320
gi 154249074 246 ALSDYDVILIDTAGRSQKNDLHMSEIKAMSEi------vSPDFTFLVIGMQYRSEDVKEVLTKFSMISPTHVILSKMDET 319
gi 83589643  263 RLEDRDIILVDTAGRAPENKAMLAETRGFLEa------mPEGAVYLVLSSATRRQDLLQAVERFRPLNYNRLIFTKLDET 336
gi 147678406 287 SHTDKDYILIDTNGRSARSTGQLLELKGFLD---VVK--EPHDIFLVLSSAAKNRDLSRIAWEFQKVGYTKLIFTKVDET 361
gi 169831893 289 RHQNKEFIFVDTAGRPARNSEKVAELHSYFAv-lDEP----ADVILVLSSNTKHRDLLRAVRHFGKVNYSKLIFTKVDET 363
                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 161936323 510 LSLGEVMCVTIQNALPIAYLADGQRVPEDIKVATGNYLV----SRANELLEQEISQQS 563
gi 258514020 384 ESLGAMLNIIYRTNIPIYYVTDGQSVPDDIEQVYPKKLA----KLLLKGVSNQNDGPG 437
gi 134300230 354 ATLGSMLNVVGKTGLPIAYYTDGQSIPDDIKRAHPKKIA----NLLFRSADRYEDC-- 405
gi 157363485 315 RSYGHIINISQLSGIPLAYITNGQRVPEDIIEANSRELShilsKEVLKVAQSG----- 367
gi 217077811 322 SSLGHFLNIGHYINSPIIFVTNGQRVPDDIMEANNKELSiilsREVLNYVKSSKQFD- 378
gi 150021315 321 SSLGHFLNAGHFINKPIIYITNGQRVPDDIIEASNKELSiilaREVLNYVKSS----- 373
gi 154249074 320 SALGHFVNVPNFLKAPIAFITNGQRVPDDILEANNRELAvllsREVLKYAKSS----- 372
gi 83589643  337 SCPGVMVTVAAAAGVPLAYVTAGQDVPDDLEVADPYLLA----ERIWKAVARDGPGGQ 390
gi 147678406 362 ETHGSILNLVCALGAPVAYLADGQEIPDDISEAGPKKIA----RLLFRGVDPDEVMAT 415
gi 169831893 364 DTLGCILNMICHTGMPVIQITDGQNVPDDIQNMYPKKLA----KLLTKGVEPDA---- 413
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