Conserved Protein Domain Family
KOG2915

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KOG2915: KOG2915 
KOG2915, tRNA(1-methyladenosine) methyltransferase, subunit GCD14 [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 230854
View PSSM: KOG2915
Aligned: 7 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 21-Jun-2003
Updated: 16-Jan-2013
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13435383 139 VSPSCSTSRERPFQAGELILAETGEGETKFKK-----LFRLNNFgl--lNSNWGAVP-FGKIVGKFPGQILRS-SFGK-- 207
gi 7301439    1 ---MSFLKPKTHIEKGDVVILYLSVSSMHAIEavpeiVNKKGETiphifQTNYGSLK-VENIIGVEYGSKVEL-SKG--- 72
gi 11358041   4 TESKKAFSFKRCIEDGDLVIVYERHDVMKPVK-----VSKDGVL-----QNRFGVYK-HSDWIGKPLGTKVFS-NKGK-- 69
gi 17509459   3 SSPPSFMSYEDRIQEGDTVIVYVTYGQMVPTI-----VKRGQTL-----MMKYGALR-HEFIIGKRWGQRLSA-TAG--- 67
gi 14603441   1 ---MSFVAYEELIKEGDTAILSLGHGAMVAVR-----VQRGAQT-----QTRHGVLRhSVDLIGRPFGSKVTC-GRGG-- 64
gi 19114479   1 ---MVFADYKQRVENGDLAVAWIGRNKLIPLH-----IEAEKTF-----HNQYGAFP-HSEMIGKRYGEQIAStAKQG-- 64
gi 1169870    1 MSTNCFSGYKDLIKEGDLTLIWVSRDNIKPVR-----MHSEEVF-----NTRYGSFP-HKDIIGKPYGSQIAIrTKGSnk 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13435383 208 --QYMLRRPALEDYVVLMKRGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVrkdHHD 285
gi 7301439   73 --WAHVLQPTPELWTQTLPHRTQIIYTPDISMIIHQLEVRPGAVVVESGTGSGSLSHYFLRALKPTGHLHTFDF---HEA 147
gi 11358041  70 --FVYLLAPTPELWTLVLSHRTQILYIADISFVVMYLEVVPGCVVLESGTGSGSLSTSLARAVAPTGHVYSFDF---HEQ 144
gi 17509459  68 --YVYILRPTSDLWTRALPRRTQILYTADCAQILSLLDAKPGSVICESGTGSGSLSHAIALTVAPTGHLYTHDI---DET 142
gi 14603441  65 --WVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEF---HQQ 139
gi 19114479  65 --FIYLLQPTPELWTLALPHRTQIVYTPDIALIHQKLRITYGTRVIEAGTGSASMSHAISRTVGPLGRLFTFEY---HAT 139
gi 1169870   70 faFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSV---GHLFSFEF---HHI 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13435383 286 LAKKNYKHWRDSWklshveeWPDNVDFIHKDISGATEDIK----------------SLTFDAVALDMLNPHVTLPVFYP- 348
gi 7301439  148 RADQARDEFRRHG-------IADFVTVYHRDVCNLGFGAEl---------------DGKADAVFLDLPAPDLAVPHAFK- 204
gi 11358041 145 RAVSAREDFEKTG-------ISSLVTVEVRDIQGEGFPEKl---------------SGLADSVFLDLPQPWLAVPSAAK- 201
gi 17509459 143 RTHKVLEEFKVHG-------LGSVTTAVVRNVCTSGFHv-----------------ENAADGVFLDVPAPWEAIPFAAKs 198
gi 14603441 140 RAEKAREEFQEHR-------VGRWVTVRTQDVCRSGFGv-----------------SHVADAVFLDIPSPWEAVGHAWD- 194
gi 19114479 140 RYQTALQEFREHEml---idVGGNTHLTHRDVCKDGFLDt----------------EVKVDAIFLDLPAPWEAIPHLSNh 200
gi 1169870  144 RYEQALEEFKEHGl------IDDNVTITHRDVCQGGFLIKkgdttsyefgnnetaaSLNANVVFLDLPAPWDAIPHLDSv 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13435383 349 HLKHGGVcavYVVNITQVIELLDgiRTCELALSCEKISEVIVRDWLVclakQKNGILAQKVESKINTDVQLDSQEKIG-- 426
gi 7301439  205 ALKLSGG---RFCSFSPCIEQSQ--RCIQELTKLGFNEIVSLEVLQ-----QENVVKTRTLPVIDLEFLKLPKTDE---- 270
gi 11358041 202 MLKQDG----VLCSFSPCIEQVQ--RTCEVLRS-DFIEIRTFEVLL-----RTYEVKEVKMDTSSMVGESHEEDNEGMrp 269
gi 17509459 199 IFRARGG---RLVSFSPCLEQVQ--RACLAMAAAGFVSIETIELVPE----QKKIVSQHRQTLEEFEELGDAYPKE---- 265
gi 14603441 195 ALKVEGG---RFCSFSPCIEQVQ--RTCQALAARGFSELSTLEVLP-----QVYNVRTVSLPPPDLG------------- 251
gi 19114479 201 VNHDKST---RICCFSPCIEQIQ--HSAEALRELGWCDIEMIEVDYKqwaaRKSRIVHIDEAIDRLKEVKRRRIEGFErr 275
gi 1169870  218 ISVDEKV---GLCCFSPCIEQVD--KTLDVLEKYGWTDVEMVEIQGRqyesRRQMVRSLNDALERLRDIKRHKLQGVErr 292
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13435383 427 --VKGELFQE----------DDHEESHSDFPYg----SFPYVARPVh---------------WQPGHTAFLVKLRKv-KP 474
gi 7301439  271 -----TTAAT----------NALESKAPKEVK-----KYLTSSNPQ----------------TLPGHTGFLTFATL--PP 312
gi 11358041 270 ckRKHRSNEN----------DTVSQDNSSNAS-----SVVMARPCS----------------EARGHTGYIAWRTVnsTP 318
gi 17509459 266 ---RKRNVDG----------TIVEQSSSAIPR-----ITIAIVYPY----------------SQPTHTGYLTHATM--LP 309
gi 14603441 252 --------------------TGTDGPAGSDTS-----PFRSGTPMK----------------EAVGHTGYLTFATK--TP 288
gi 19114479 276 kmRREQNLSSdakve-dqdnDSMLGENKSSVStetalKPVTNKRIRegdgnyewtdvarvdsNLKSHTSYLLFAVH--LP 352
gi 1169870  293 krMFNNTIDSndekvgkrneDGVPLTEKAKFN-----PFGKGSRIKegdsnykwkevtkmeaEIKSHTSYLTFAFKvvNR 367

                ...
gi 13435383 475 QLN 477
gi 7301439  313 NIP 315
gi 11358041 319 ELF 321
gi 17509459 310 VAE 312
gi 14603441 289 G-- 289
gi 19114479 353 SQL 355
gi 1169870  368 SRD 370
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