Conserved Protein Domain Family
KOG2009

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KOG2009: KOG2009 
KOG2009, Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
Statistics
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PSSM-Id: 229948
Aligned: 7 rows
Threshold Bit Score: -1
Created: 21-Jun-2003
Updated: 16-Jan-2013
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
21281669 1394 DKTEVQGIQSPDVPEQFSDINLSKSLPQEQKPLEIKPAPFVRSRFKRPKPNLARAALKRETTESEkYIYEKKSETKKMET 1473 human
22946398   80 VFHSDLEDNVIQMDLQKTTNGFPMSPSKAQARQRVRPTPVFGQRRNSFVGSPMASDYEGDYQSPA--TPTRRERYLSGSS 157  fruit fly
15234963    1 ------------MDLDFDDQPSDHAAPADALPSETN-VPDSGSINKSTIGTLS--EENEDAFPRG-VHWSVKPSILRACN 64   thale cress
17505318  105 QNAQFASPNPPARLTPRSRNVSMCEDEAILQPKQPRDKKRFSGREELDTKTWKMSDLTRWNPKNE-MTRFKRERRSSTSS 183  Caenorhabditis el...
19173062      --------------------------------------------------------------------------------      Encephalitozoon c...
19075996    1 ---------------------------------MSRFAPKFTARREKVSDQKEVVHEEKNQPLTG--NEVETSAQLSRDT 45   fission yeast
1174647     1 MSSIVNKSGTRFAPKVRQRRAATGGTPTPKPRTPQLFIPESKEIEEDNSDNDKGVDENETAIVEKpSLVGERSLEGFTLT 80   baker's yeast
21281669 1474 IVMQENNEQTDTLPSQHDEASLMISREKDTLGHRNEEAVILPCTQTERNLSPSNSCEPKEEsqSAPVQKNDSVVSVGTNN 1553 human
22946398  158 SGTPLQQQVHSPMPPSPYKYLPPASPGMGRIRTESTCSTYSEGGSKQRKGDDRSQSQIGQRlnARRDFETRFNKGVPDKS 237  fruit fly
15234963   65 NVNLVGNRRDDGIEATTSFPDDPRTQDSAIFGDYVTPETGADEGRVDMETLDIVQEEGTTS--SYVQHTGKLQPKPRLLE 142  thale cress
17505318  184 SVITKSEIGDLDAPPAPRINAPQVKIGADGRLVIDETSLVVHSAQINHESVWETVEEGRMGa-KITSMSFRKRGFGKSSF 262  Caenorhabditis el...
19173062      --------------------------------------------------------------------------------      Encephalitozoon c...
19075996   46 ANADISSPVVQTVVHKEATENPTASSYRKDD-SVKQNEKLLHSNPTFKISKPTVLEQPLN---AIEHLSPETDLSSSAEQ 121  fission yeast
1174647    81 GTNGHDNEIGDEGPIDASTQNPKADVIEDNV-TLKPAPLQTHRDQKVPRSSRLASLSKDNE--SRPSFKPSFLDSSSNSN 157  baker's yeast
21281669 1554 VNTFQQEMKES-VIQTARQVRGRLQRPRPNIRKTGQRQIVDKGEAKGIIkegrtilPKDETEKKVLTVSNSQIETEIEVP 1632 human
22946398  238 TFKMMDMIFYNpENNPMVPKQSVTTIKDESGGDDSKPAVSQLLEPKGES-------TSAMLVPQLKLDANGEMIIDEKTL 310  fruit fly
15234963  143 TVVEEPEPHYS---AGDTGYFPMGTNESEFMANVESRNGFSTYEDLQEE---------ELNIPEAPRETVGEMEAQNASG 210  thale cress
17505318  263 WSEKETDLFYE-VLQCTGQDFGLMSHYLPKRTRPELKAKYNREEKINWAr------VLNAISHPVRLDGNLEVRISKLMT 335  Caenorhabditis el...
19173062      --------------------------------------------------------------------------------      Encephalitozoon c...
19075996  122 QFMKELDLFFD-ENIPLSQLSAVSDGKADSPATKKSRRSYRESSLKRKS---------QLILENVGTDEKIIN-ISETKM 190  fission yeast
1174647   158 GTARRLSTISN-KLPKKIRLGSITENDMNLKTFKRHRVLGKPSSAKKPAgahrisiVSKISPPTAMTDSLDRNEFSSETS 236  baker's yeast
21281669 1633 SSAVPEHRMYENQSQ-VVLVENLHVNKTNETIRHENKPYVPSSAQMTRRKFQ--KAKPNLGRAHSKKEEPVLEKVTTDqS 1709 human
22946398  311 EIETTAEVEARKVLAnSSLILMDETTGDNGFYKRHKRTPYWTSDETVRFYRS--LQIIGTDFSLMCQMFPTRSRRDLKlK 388  fruit fly
15234963  211 GWEQEEQGVSPCINN-TVTGEEENCMGNTVEEQSKRESKTGKSKRATSRKRKktSEEPNKSSEKTEQKKFKHSSRRQKrT 289  thale cress
17505318  336 EMEEEAQEKKAKGEY-EKAEEKRIREQNRLQKATERNQAKELVKQAKELERD--ARNAAKLNMKADKEARAQEKSETR-Q 411  Caenorhabditis el...
19173062    1 -----------------------------------------------------------------------MRRRHVK-F 8    Encephalitozoon c...
19075996  191 SALCDDPGIGRKSQR-FIELEKMLFEEKRAKRIKKQGASTASSSREASLDS---TIKQPLSASLLESSEPKEKEEIVG-S 265  fission yeast
1174647   237 TSREADENENYVISK-VKDIPKKVRDGESAKYFIDEENFTMAELCKPNFPIG--QISENFEKSKMAKKAKLEKRRHLR-E 312  baker's yeast
21281669 1710 KEGKPEDHLLQKGASNTQLLLKEKAELLTSLEVSARKDCVgSKESALAKIDAELEEVGPSRRVGEETVGDNSP--SSVVE 1787 human
22946398  389 YKKEERTNGQLINKALLYPKAFNIQELKDQLEEEDREREE-NDRKWREIARALPGNPKKRSRVQQQSKASRALndGDVVY 467  fruit fly
15234963  290 LEKELLETPDHEIRSLPLRDMLRLVEYKEWMQKKEAKGAGvQPSQESNNMNGSGSQYHSQGFDEEDEFGDFGIe-SSEYQ 368  thale cress
17505318  412 LEKTALKEARLMATEAKRIAMEARAIIKESRKLEKSKKAD-SVQSDSHNLEREAER-IIRRLLQESQREDRRTahFNKND 489  Caenorhabditis el...
19173062    9 FEGSNTHRMDQKLKHFLDNSNFRQDRRSRKKKASASRDI--ADQNQEEILMIKN---GHIVVNDANMYVDTHK-----VM 78   Encephalitozoon c...
19075996  266 LEEEGTDESASLEDSLSHPTKSILDQLADKMEVDGLNNN--SNYSATPRTRVVN---GQIVLDETSLEVDRHErdFVPAE 340  fission yeast
1174647   313 LRMRARQEFKPLHSLTKEEQEEEEEKRKEERDKLLNADIPeSDRKAHTAIQLKLNPDGTMAIDEETMVVDRHKnaSIENE 392  baker's yeast
21281669 1788 EQYLNKLTSCP--QPLNETSYSKIALDGKTTISSTSEYERNRGERRSHKKFKPNVTRGRGSKRVRGKTSKKEPRASKAML 1865 human
22946398  468 ENEHVTSTKLG---KHAWAKRRKELETDENDGSAPAKRKPKAKRRSPKVSVPAATESLSDVAAIKQEKTIKTEQTSSHLP 544  fruit fly
15234963  369 ENNVVKPDS-----PVNYQTYMNKTSRTRWSKEDTELFYEGIQEFGSNLSMIQQLFPERTREQMKLKFKLEERRNPLKLN 443  thale cress
17505318  490 KPAAPKSTEEAttSEVSAPTKSPAPVVVTIDASEGELGDTSTDAADSSSASSSDDDALRKDAARREKQRMKEARRNLKPR 569  Caenorhabditis el...
19173062   79 EMEVMEDD-----RIVTSSTFSKKKGALRWSKKEIELFYKALEICGIEFSLISSLFPNKERKHIKAKYIKEAKVNPERIN 153  Encephalitozoon c...
19075996  341 EREYVEENSLS--RRVTSATWGNRQKPEKWNAMDTEKFYKALSQWGTDFALIANMFPTRNRRQIKLKFKQEERRNPARVN 418  fission yeast
1174647   393 YKEKVDENPFA--NLYNYGSYGRGSYTDPWTVEEMIKFYKALSMWGTDFNLISQLYPYRSRKQVKAKFVNEEKKRPILIE 470  baker's yeast
21281669 1866 VTLRASQEEDDDADDFesDYEEESYHLAPEEVNKAPVFVPVGLRSPEPVSAQIEETMEELEITVNVPDVGCIAVVEHELP 1945 human
22946398  545 TGGELQAELNGLLMDDpvEYDVDVNKPRDKTIINMDDGTLSYVSDVEPAPETPNRKAETYLINFIEDQDHELITPDDPIP 624  fruit fly
15234963  444 DALSSRSKHFTHFKN--------VIKKLQQEAAAAKEGEEEEEAGAEAETTDVPENEEPEKSEETERASDGVAAGVKESD 515  thale cress
17505318  570 KTVADKKPVYVDTTDP--KYAQQKVSRAVEMVLKANGNMFDSAGEQDDDFPDPDEMETSAEPVVVEEVAPDPTPPPPENM 647  Caenorhabditis el...
19173062  154 EVLNECKTFDQVAYN-------KLRSYLLE-------------------------------------------------- 176  Encephalitozoon c...
19075996  419 QALKIKKPIDMEEYS-------KVSGKVFRPVEEMEKELQKIRENFEEERRRAIEVAEQRQLIVNHELEQEKNAPSPTDD 491  fission yeast
1174647   471 LALRSKLPPNFDEYCCeiKKNIGTVADFNEKLIELQNEHKHHMKEIEEAKNTAKEEDQTAQRLNDANLNKKGSGGIMTND 550  baker's yeast
21281669 1946 NTDVTTEEMKQEENLSVPFEMTTSEHIQDEPGTNDGSTEAAITL 1989 human
22946398  625 -PSTTEPDIEQILAELAEGSLALVSSLDPEHEDRVLNEIYMLDK 667  fruit fly
15234963  516 -GGDVENGVRSDGGDECDDDEDFWNSYKSDM------------- 545  thale cress
17505318  648 EENVVEESVPQSVIDVVEEIMRGRSKTPVETAVKPLENTEESKT 691  Caenorhabditis elegans
19173062      --------------------------------------------      Encephalitozoon cuniculi
19075996  492 KSYVFEDGVEVVGQVV---------------------------- 507  fission yeast
1174647   551 LKVYRKTEVVLGTIDDLKRKKLKERNNDDNEDNEGSEEEPEIDQ 594  baker's yeast
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