1EQZ,2HIO


Conserved Protein Domain Family
KOG1744

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KOG1744: KOG1744 
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KOG1744, Histone H2B [Chromatin structure and dynamics]
Statistics
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PSSM-Id: 229683
Aligned: 58 rows
Threshold Bit Score: -1
Created: 21-Jun-2003
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1EQZ_B     1 MPEPA-KSAPAPKK--------------------GSKKAVTKTQKKGD--------------KKRK-----------KSR 34  chicken
15223150  68 derslpvgenvttvkipvddrdesspqppetpvevrdepspqppetpasksegtlkktdkvekkqenkkkkkkkkrddla 147 thale cress
19173367   1 MAKSArHVTGKAPS--------------------SLDAHDRKKSKK----------------KSSS-----------MCV 33  Encephalitozoon cun...
30156866 329 MAEPSsEMTSNKGLstk--------------epkAANATMAHKQKRHG--------------HSHP-----------SRC 369 human
18561623   1 MARSStKKYKYSKRh-------------------QTPTSRKKAKKAYS----------------SI-----------DFG 34  human
30156793     --------------------------------------------------------------------------------     human
29744159  18 LVSDLtQNLPGHGVlkqfhpdisttlnflgimndFLIDIFEHITTKAGcqvatlsaplsppeRSRPpepdavwgypqTRC 97  human
12231003   1 -MS-AaEKKPASKApa-----------------gKAP--RDTMKSAD---------------KKRG-----------KNR 33  fission yeast
122035     1 -MSSAaEKKPASKApa-----------------eKKPAAKKTSTSVDG--------------KKRS-----------KVR 37  baker's yeast
122024     1 -MSAKaEKKPASKApa-----------------eKKPAAKKTSTSTDG--------------KKRS-----------KAR 37  baker's yeast
1EQZ_B    35 KESYSIYVYK---VLKQVHPD--TG----ISSKAMGIMNSFV--------NDI-FERIAG---EASRLAHYNKRST---- 89  chicken
15223150 148 gDEYRRYVYK---VMKQVHPD--LG----ITSKAMTVVNMFM--------GDM-FERIAQ---EAARLSDYTKRRT---- 202 thale cress
19173367  34 GSMFKSAVKR---ISREVSPDnnIM----LTSNSIQVLCGIS--------YDF-VDTVAD---LAGELARKVGKQT---- 90  Encephalitozoon cun...
30156866 370 RDSFTTYFPR---VLKQVHAG--LS----LSPEAVDVIDSFV--------HDI-LEHIAT---KAGHLAHYTKCTT---- 424 human
18561623  35 HGNYSFFVNK---VLKEVVPC--RG----ISSRTLDLMNALI--------NFL-FQHIAI---KAYRLMYSRNRCT---- 89  human
30156793   1 mggvtypviqvppgttgscthqpssgrsgtprletlagiahldtsstggilvifvyntiamateGNLNPEVLGCSG---- 76  human
29744159  98 IENQSECVARgeeAWRAVDPSqnLGlaltILREDKGVSRSYFpskgkvpkNETgFPDLLSgmpSPGRYGHSRPDPIpvpp 177 human
12231003  34 KETYSSYIYK---VLKQVHPD--TG----ISNQAMRILNSFV--------NDI-FERIAT---EASKLAAYNKKST---- 88  fission yeast
122035    38 KETYSSYIYK---VLKQTHPD--TG----ISQKSMSILNSFV--------NDI-FERIAT---EASKLAAYNKKST---- 92  baker's yeast
122024    38 KETYSSYIYK---VLKQTHPD--TG----ISQKSMSILNSFV--------NDI-FERIAT---EASKLAAYNKKST---- 92  baker's yeast
1EQZ_B    90 ITSREIQT-AVRLLLP-----GELAKHAVSEGTKAVTK---YTSSK 126 chicken
15223150 203 LSSREIEA-AVRLVLP-----GELSRHAVAEGSKAVSN---FVGYD 239 thale cress
19173367  91 VGSDDIIS-AFEILLK-----GELRKLAIREVHNALSKsqaKSRGK 130 Encephalitozoon cuniculi
30156866 425 ITSCEMQT-TIRLMFP-----GQMGKHAISRGSKTLLH---YTRSK 461 human
18561623  90 LPLKIS---------------------------------------- 95  human
30156793  77 IISREVQT-VFHLLLP-----IKVAVHTGSEGMKAVIK---YISHK 113 human
29744159 178 FSSTHLPLpWFALHQPakdcqGSLLVCALLKGTVPVAVcteLNVSS 223 human
12231003  89 ISSREIQT-AVRLILP-----GELAKHAVTEGTKSVTK---YSSSA 125 fission yeast
122035    93 ISAREIQT-AVRLILP-----GELAKHAVSEGTRAVTK---YSSST 129 baker's yeast
122024    93 ISAREIQT-AVRLILP-----GELAKHAVSEGTRAVTK---YSSST 129 baker's yeast
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