1FTN,1DS6,1I4D,1GRN,1I4T


Conserved Protein Domain Family
KOG0393

?
KOG0393: KOG0393 
Click on image for an interactive view with Cn3D
KOG0393, Ras-related small GTPase, Rho type [General function prediction only]
Statistics
?
PSSM-Id: 228342
View PSSM: KOG0393
Aligned: 75 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 20-Jun-2003
Updated: 16-Jan-2013
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FTN          1 Ma--------AIRKKLVIVGDGACGKTCLLIVNSKD------QFPEVYVPTVF--ENYVAD-----------IEV----- 48
gi 7291121    1 ----------------------------------------------MQSQSARs-ERPKTD-----------VNVn---- 18
gi 28380608 262 Ls--------QAYTDLVLVGAGGTKFAVHRFMLAAAs----sIFQRLLSTELTdmGGRSSSessmvsstfgeATIadf-- 327
gi 17560062   7 E----------KCLKCIFVGNAAVGKTSMIVSYTTN------VYPHNYVPTAF--DNFSVV-----------VLVd---- 53
gi 17541976   1 ----------MQAIKCVVVGDGAVGKTCLLLSYTTN------AFPGEYILTVF--DTYSTN-----------VMVd---- 47
gi 11034843  37 GgrgraggaeGRGVKCVLVGDGAVGKTSLVVSYTTN------GYPTEYIPTAF--DNFSAV-----------VSVd---- 93
gi 26006845  11 N---------VETIKCVVVGDNAVGKTRLICARACNatltqyQLLATHVPTVWaiDQYRVC-----------QEVlersr 70
gi 20070360  31 G------------IKCVLVGDGAVGKSSLIVSYTCN------GYPARYRPTAL--DTFSVQ-----------VLVd---- 75
gi 26006842  11 N---------VETIKCVVVGDNAVGKTRLICARACNttltqyQLLATHVPTVWaiDQYRVC-----------QEVlersr 70
gi 29743098 269 phtqfdhilslyshllqlfefytsfiplqfyldnkvkfviisALLGEEIPIVF--DNYSAS-----------VTVd---- 331
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FTN         49 ---DGKQVE-----LALWDTA-GQEDY--------------DR-LR---PL--SYPDT---------------------- 77
gi 7291121   19 ----eSPVH-----LTICDTA-GQDTL--------------DP-LR---EL--CYPDS---------------------- 46
gi 28380608 328 nddTEALIRyesrtQRMWEHLkRRSSYqalplmeskrsndlYReLHh--PVlqSIRLVhvenhrgvnglqtivtlsklis 405
gi 17560062  54 ----kKPIR-----LQLHDTA-GQSSF--------------DT-LR---PL--CYTDA---------------------- 81
gi 17541976  48 ----gRPIN-----LSLWDTA-GQEDY--------------DQ-YErknLK--NFSKNe--------------------- 79
gi 11034843  94 ----gRPVR-----LQLCDTA-GQDEF--------------DK-LR---PL--CYTNT---------------------- 121
gi 26006845  71 dvvDDVSVS-----LRLWDTF-GDHHK--------------DR--R----F--AYGRS---------------------- 100
gi 20070360  76 ----gAPVR-----IELWDTA-GQEDF--------------DR-LR---SL--CYPDT---------------------- 103
gi 26006842  71 dvvDEVSVS-----LRLWDTF-GDHHK--------------DR--R----F--AYGRS---------------------- 100
gi 29743098 332 ----gKTSE-----FGLKGYN-WMTEY--------------DGl-----HFl-SYLQT---------------------- 359
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FTN         78 -------DVI-LM------C-----------FS--------IDSPDSLENIPEKW------TP---EVKHFC-------- 107
gi 7291121   47 -------DVF-LL------C-----------FS--------VVKPETFRAIKTKW------AP---KFAKTK-------- 76
gi 28380608 406 pqalhqcLRFiYTgtidkdCdnieeireaadLLelpqltqlLSRPQTVMENSSDEpnphicLRikeSMERHCigdgcfsd 485
gi 17560062  82 -------DVF-VI------V-----------YS--------VVDLQSFEDVSHHW------YP---EVTKRN-------- 111
gi 17541976  80 -------PDF-IN------I-----------FSny-----lITFFQNSANISTKN------FH---KQTYFStt------ 114
gi 11034843 122 -------DIF-LL------C-----------FS--------VVSPSSFQNVSEKW------VP---EIRCHC-------- 151
gi 26006845 101 -------DVV-VL------C-----------FS--------IANPNSLHHVKTMW------YP---EIKHFC-------- 130
gi 20070360 104 -------DVF-LA------C-----------FS--------VVQPSSFQNITEKW------LP---EIRTHN-------- 133
gi 26006842 101 -------DVV-VL------C-----------FS--------IANPNSLNHVKSMW------YP---EIKHFC-------- 130
gi 29743098 360 -------DEFfIC------Fsfe----------------llDIDSEPAALLSSSYa----iLPilmTTTLHRh------- 399
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FTN        108 ----------PNVPIILVG----NKKDLR---NDE--------HTRRELAKM-----------KQEPVKPEEGRDMANRI 151
gi 7291121   77 ------------AALILVG----TQADLR---TSP--------NVLNKLQTN-----------GEEAISYADAWDLATTI 118
gi 28380608 486 vtfelddglmKAHRAVLVGrcdvMRAMLLgdfREAhsnvivfpGVTIYTFHKllcylytdqipPISAVKCLNLLELANRL 565
gi 17560062 112 ----------PGTKLILVG----TQADQRw-qV------------------------------RGNTVTQLRGKALADRL 146
gi 17541976 115 ---------rRVSSLYWNA----SSQDLQ---DSP--------STARSNQSHkcrypptsnqtCNDNYRNPCRRAPPNSL 170
gi 11034843 152 ----------PKAPIILVG----TQSDLRe-dVKV---------LI-ELDKc-----------KEKPVPEEAAKLCAEEI 195
gi 26006845 131 ----------PRAPVILVG----CQLDLRy--ADLea----vnRARRPLARPi---------kPNEILPPEKGREVAKEL 181
gi 20070360 134 ----------PQAPVLLVG----TQADLRd-dVNV---------LI-QLDQGg----------REGPVPQPQAQGLAERI 178
gi 26006842 131 ----------PRTPVILVG----CQLDLRy--ADLea----vnRARRPLARPi---------kRGDILPPEKGREVAKEL 181
gi 29743098 400 ----------HEISTVLKFknicTHEVVQishIALhiiwmltdLHQRKLERQ-----------NASIVILSQPDYLAAES 458
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*..
1FTN        152 GA---FGYMECSAKTKDG--VREVFEMATRAALQ--------ARRG----KKKSGCL 191
gi 7291121  119 G----AKYIETSSATQGA--YPNDYKG------------------------------ 139
gi 28380608 566 CLprlLNLVECRVIEDLTliSQNETNETVDHCLKllepvklhNAHQlaewCMSYLCV 622
gi 17560062 147 G----AEFFECSALTQHN--LKQMFDAAILAGLEgkknrekrSNFYtk--sSKIKER 195
gi 17541976 171 GS---ARHILHFLPEHSC--LVPPFHRNLLYKTTipsf------------------- 203
gi 11034843 196 KA---ASYIECSALTQKN--LKEVFDAAIVAGIQysdtqqqpKKSKsr-tPDKMKNL 246
gi 26006845 182 G----IPYYETSVVAQFG--IKDVFDNAIRAALIsrrhlqfwKSHLrn-vQRPLLQA 231
gi 20070360 179 RA---CCYLECSALTQKN--LKEVFDSAILSAIEhkarlekkLNAKg------VRTL 224
gi 26006842 182 G----LPYYETSVFDQFG--IKDVFDNAIRAALIsrrhlqfwKSHLkk-vQKPLLQA 231
gi 29743098 459 GK---NAASDLNYIAQKLs-QRSVSRSPVPDASAaaqgetip--------------- 496
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap