1J5N


Conserved Protein Domain Family
KOG0381

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KOG0381: KOG0381 
KOG0381, HMG box-containing protein [General function prediction only]
Statistics
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PSSM-Id: 228330
View PSSM: KOG0381
Aligned: 73 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 20-Jun-2003
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1J5N_A     2 VTPREPKKRTTRKK------------------------------K----DP----NAPKRALS--AY----MFFANE-NR 36  baker's yeast
7291251  146 EHPEIVANELAKAK------------------------------Ka---TKldgsPKEKTPKGesALg---KAKKTKaKP 189 fruit fly
7300869    1 ------------MS------------------------------D----CG----ARPKKPMS--AF----MLWMNS-TG 23  fruit fly
7300870    1 ------------MS------------------------------D----YG----ARPKKPMS--AF----MLWMNS-TG 23  fruit fly
7485471    1 MTKRAPKSGPLSPS------------------------------Csg-gSSrnleLAVKSSEG--AR----RSTRLRlQP 43  thale cress
17473121 195 FQKNIEEVRSLPKT------------------------------Drf-fKKvkfhGEPQKPPMn-GY----HKFHQD-SW 237 human
20561190 195 VQKNIEEVRSLPKT------------------------------Drf-fKKvkfhGEPQKPPMn-GY----HKFHQD-SW 237 human
5454080   94 NKAREAELRRLRKM------------------------------NvafeEQnavlQRQNAEHEqrARasgaGAGAGGaED 143 human
136652   541 YERELSEMRAPPAA------------------------------Tns-sKKmkfqGEPKKPPMn-GY----QKFSQE-LL 583 human
30154507 374 GPAKG--GRKKKDPnapkmppsgfflfysefrskinstkpsisiGal-iSEaagrIWHFDPIS--SL----LGQSGR-QR 443 human
1J5N_A    37 DIVRSENPD---ITFGQVGKKLG--EKWKALTPEEKQP-Y---EAKAQADKKRYESEKE--------LYNATLA 93  baker's yeast
7291251  190 VKRQSEDPDd--VPLAKVKRAQTppPPTPPAAPVQPPPsSv--PPATPAPRPLQPGEIPiytn-efiEHNRSTE 258 fruit fly
7300869   24 RKHIKAEHPd--FSVQEVSVKGG--EMWRAMADEDKIV-W---QESATTAMAEYKEKLK--------QWNFPKE 81  fruit fly
7300870   24 RKNIRAEHPd--FSVQEVSVKGG--EMWRAMADEHKIV-W---QESASKAMAEYKEKLE--------KWNAFKE 81  fruit fly
7485471   44 LRKPKTSPKk--KPVKLQTKMPKkpATAFFFFLDDFRKqYqeeNPDVKSMREVVEYYFVg-------FIGKTCG 108 thale cress
17473121 238 SSKEMQHLS-----VRERMVEIG--RRWQRIPQSQKDH-F---KSQAEELQKQYKVKLDlwlktlspENYAAYK 300 human
20561190 238 SSKELQHLS-----VRERMVEIG--RRWQRIPQSQKDH-F---KSQAEELQKQYKVKLDlwlktlspENYAAYK 300 human
5454080  144 AGAAAAAPGrapGAHRQLRLTAGagHGRNAHAGHSGLLhGp--ASRSHRARPRPAREAHrphqgnpgPGRQRAP 215 human
136652   584 SNGELNHLP-----LKERMVEIG--SRWQRISQSQKEH-Y---KKLAEEQQKQYKVHLDlwvkslspQDRAAYK 646 human
30154507 444 CSTQQLSSF---TEAPHTHKAPPkpSSHLPLGNERTSAqF---LAGGSDRRPSAPEVSG--------LDKQSQA 503 human
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