Conserved Protein Domain Family
XynA

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COG3693: XynA 
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]
Statistics
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PSSM-Id: 226217
Aligned: 9 rows
Threshold Bit Score: -1
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2494333   369 ALKEVLKDYF---KVGVALPSKV-------F--LNPKD---I--ELITK----------------H-------------F 402  Thermotoga maritima
15889644    5 GCGGGLMRIGrrnFLGGAASAGLlhavagpAfaAQKKAaikTapYGAAIylpdlt-----adsriGeav-------vkyC 72   Agrobacterium tum...
139867      9 FVAGLAISLLvggGIGNVAAAQGgppksgvFgeNEKRNdqpFawQVASLseryqeqfdigaavepYqlegrqaqilkhhY 88   Bacillus halodurans
15004757    5 KLSKICTGVL---ALGLALSISGvg----tFkaAMSHSk--FvgNIIAGsips--------nfdtY-------------W 54   Clostridium aceto...
15004819    5 KLAKICTGVL---ALGLALSISGvg----tAkaAMSHSk--FvgNIIAGnvpn--------nfsnY-------------W 54   Clostridium aceto...
16127035    4 SRRDLLAAGAagaLAGPALAAEGp-----sLreLAKAKgivFgsAVGAGpkgsit-----gsfedAryrei----lareC 69   Caulobacter cresc...
16127272    1 MQSQPVADTP----LKSIASTPVg-----aClqRHQLDdpaFaaLLTRH------------------------------Y 41   Caulobacter cresc...
15642845    3 ILPSVLILLL---GCVPVFSSQNvs----lRelAEKLNi--YigFAAINnfws--------lsdaEkymev----arreF 61   Thermotoga maritima
17231940    6 KFLRRAGYTTlsaFLTMGFLQRDkqrdsrsTdiAAINTnypLrqLAAAKgkryga----avdsetLkkypdyakliareC 81   Nostoc sp. PCC 7120
15889644    5 GCGGGLMRIGrrnFLGGAASAGLlhavagpAfaAQKKAaikTapYGAAIylpdlt-----adsriGeav-------vkyC 72   Agrobacterium tum...
139867      9 FVAGLAISLLvggGIGNVAAAQGgppksgvFgeNEKRNdqpFawQVASLseryqeqfdigaavepYqlegrqaqilkhhY 88   Bacillus halodurans
15004757    5 KLSKICTGVL---ALGLALSISGvg----tFkaAMSHSk--FvgNIIAGsips--------nfdtY-------------W 54   Clostridium aceto...
15004819    5 KLAKICTGVL---ALGLALSISGvg----tAkaAMSHSk--FvgNIIAGnvpn--------nfsnY-------------W 54   Clostridium aceto...
16127035    4 SRRDLLAAGAagaLAGPALAAEGp-----sLreLAKAKgivFgsAVGAGpkgsit-----gsfedAryrei----lareC 69   Caulobacter cresc...
16127272    1 MQSQPVADTP----LKSIASTPVg-----aClqRHQLDdpaFaaLLTRH------------------------------Y 41   Caulobacter cresc...
15642845    3 ILPSVLILLL---GCVPVFSSQNvs----lRelAEKLNi--YigFAAINnfws--------lsdaEkymev----arreF 61   Thermotoga maritima
17231940    6 KFLRRAGYTTlsaFLTMGFLQRDkqrdsrsTdiAAINTnypLrqLAAAKgkryga----avdsetLkkypdyakliareC 81   Nostoc sp. PCC 7120
2494333   403 NSITAENEMKPESLLAgiENGklKFRFETADKYIQFVEENGMVIRGHTLVWHN--QTPDWFFKDEng-----------nl 469  Thermotoga maritima
15889644   73 SRITPVTEMKWEVMRP--SAE--VFDFAAADALANFARQHKLSMHGHPLIWYA--SNAPWLAS----------------- 129  Agrobacterium tum...
139867     89 NSLVAENAMKPESLQP--REG--EWNWEGADKIVEFARKHNMELRFHTLVWHS--QVPEWFFIDEdgnrmvdetdpdkre 162  Bacillus halodurans
15004757   55 NQVTPENATKWGAIEY--GRG--NYNWGSADLIYNYARSKNMPFKFHNLVWGS--QQLTWLSN----------------- 111  Clostridium aceto...
15004819   55 NQVTPENATKWGAIEY--SRG--NYNWGSADLIYNYARSKNMPFKFHNLVWGS--QQPNWMSN----------------- 111  Clostridium aceto...
16127035   70 GVLVHENELKWYVLRArgPQG--FD-FERADRIADFAKANGQALRGHTLLWHHpqWFPNWVKGHDfg------------a 134  Caulobacter cresc...
16127272   42 SQITAEWEMKMEYILQ--DDG--RFRFDRPDAIADFARRHGLRLHGHALIWYS--QVMPAFRALD--------------- 100  Caulobacter cresc...
15642845   62 NILTPENQMKWDTIHP--ERD--RYNFTPAEKHVEFAEENDMIVHGHTLVWHN--QLPGWITGRE--------------- 120  Thermotoga maritima
17231940   82 SIVTPNGELKWNATEP--QPG--YFTFEAADAIANFCQKHNLKMHGHTLFWNM--AKPDWLPY----------------- 138  Nostoc sp. PCC 7120
15889644   73 SRITPVTEMKWEVMRP--SAE--VFDFAAADALANFARQHKLSMHGHPLIWYA--SNAPWLAS----------------- 129  Agrobacterium tum...
139867     89 NSLVAENAMKPESLQP--REG--EWNWEGADKIVEFARKHNMELRFHTLVWHS--QVPEWFFIDEdgnrmvdetdpdkre 162  Bacillus halodurans
15004757   55 NQVTPENATKWGAIEY--GRG--NYNWGSADLIYNYARSKNMPFKFHNLVWGS--QQLTWLSN----------------- 111  Clostridium aceto...
15004819   55 NQVTPENATKWGAIEY--SRG--NYNWGSADLIYNYARSKNMPFKFHNLVWGS--QQPNWMSN----------------- 111  Clostridium aceto...
16127035   70 GVLVHENELKWYVLRArgPQG--FD-FERADRIADFAKANGQALRGHTLLWHHpqWFPNWVKGHDfg------------a 134  Caulobacter cresc...
16127272   42 SQITAEWEMKMEYILQ--DDG--RFRFDRPDAIADFARRHGLRLHGHALIWYS--QVMPAFRALD--------------- 100  Caulobacter cresc...
15642845   62 NILTPENQMKWDTIHP--ERD--RYNFTPAEKHVEFAEENDMIVHGHTLVWHN--QLPGWITGRE--------------- 120  Thermotoga maritima
17231940   82 SIVTPNGELKWNATEP--QPG--YFTFEAADAIANFCQKHNLKMHGHTLFWNM--AKPDWLPY----------------- 138  Nostoc sp. PCC 7120
2494333   470 LSKEAMTERLKEYIHTVVGHFKGK--VYAWDVVNEAVDpNQPd--GLRRSTWYQ-IMGPDYIELAFKFARE-ADPDAKLF 543  Thermotoga maritima
15889644  130 VGGAKVEKLMETHIVTVMERYKDV--IHSWDVVNEPIP-DVPgnvRARRDAWYY-GAGPDAIKKAFDIAHA-VDPKAQLV 204  Agrobacterium tum...
139867    163 ANKQLLLERMENHIKTVVERYKDD--VTSWDVVNEVID-DGG---GLRESEWYQ-ITGTDYIKVAFETARKyGGEEAKLY 235  Bacillus halodurans
15004757  112 LSPQDQKSEVSKWIAAAGQRYSG---SAFVDVVNEPLH-TQP---SYKNALGGDgSTGYDWIVWSYQQARK-AFPNSKLL 183  Clostridium aceto...
15004819  112 LSPQDQRSEVSKWIAAAGKRYSG---SAFVDVVNEPLH-TQP---SYKNALGGSgSTGYDWIVWSYQQARK-AFPHSKLL 183  Clostridium aceto...
16127035  135 KPAEAAAKMVTEHIQALCRRYPQ---MISWDVVNETVDpADG---SIRSTFLSDaMGKEEVLDLSFHVARE-AAPKARLV 207  Caulobacter cresc...
16127272  101 GQGKRFADAYRNYILAVAGRYRGL--AASWDVINEAVD-DNGv--DLRRSAWTDnLGVDEHMILAFHHAKE-ADPDAVLF 174  Caulobacter cresc...
15642845  121 WTKEELLNVLEDHIKTVVSHFKGR--VKIWDVVNEAVS-DSG---TYRESVWYK-TIGPEYIEKAFRWAKE-ADPDAILI 192  Thermotoga maritima
17231940  139 ---PPTIPMIERHFNGVMGHYRNSevLISWDIANEIIAySEDe--AKASTYGLHkGVKPELIRDVFLIAAS-IDSSKKFY 212  Nostoc sp. PCC 7120
15889644  130 VGGAKVEKLMETHIVTVMERYKDV--IHSWDVVNEPIP-DVPgnvRARRDAWYY-GAGPDAIKKAFDIAHA-VDPKAQLV 204  Agrobacterium tum...
139867    163 ANKQLLLERMENHIKTVVERYKDD--VTSWDVVNEVID-DGG---GLRESEWYQ-ITGTDYIKVAFETARKyGGEEAKLY 235  Bacillus halodurans
15004757  112 LSPQDQKSEVSKWIAAAGQRYSG---SAFVDVVNEPLH-TQP---SYKNALGGDgSTGYDWIVWSYQQARK-AFPNSKLL 183  Clostridium aceto...
15004819  112 LSPQDQRSEVSKWIAAAGKRYSG---SAFVDVVNEPLH-TQP---SYKNALGGSgSTGYDWIVWSYQQARK-AFPHSKLL 183  Clostridium aceto...
16127035  135 KPAEAAAKMVTEHIQALCRRYPQ---MISWDVVNETVDpADG---SIRSTFLSDaMGKEEVLDLSFHVARE-AAPKARLV 207  Caulobacter cresc...
16127272  101 GQGKRFADAYRNYILAVAGRYRGL--AASWDVINEAVD-DNGv--DLRRSAWTDnLGVDEHMILAFHHAKE-ADPDAVLF 174  Caulobacter cresc...
15642845  121 WTKEELLNVLEDHIKTVVSHFKGR--VKIWDVVNEAVS-DSG---TYRESVWYK-TIGPEYIEKAFRWAKE-ADPDAILI 192  Thermotoga maritima
17231940  139 ---PPTIPMIERHFNGVMGHYRNSevLISWDIANEIIAySEDe--AKASTYGLHkGVKPELIRDVFLIAAS-IDSSKKFY 212  Nostoc sp. PCC 7120
2494333   544 YNDY-----NTFEPRKRDIIYNLVKDLKEKGL-IDGIGMQCH--------ISLA-TDIKQIEEAIKKFSTIpGIEIHITE 608  Thermotoga maritima
15889644  205 LNEYdvefaVEKSPAKRAAFRNLILELLEKGApINAVGLQGH--------LRGGwPIAKDELAAFTTEMRSyGLAVMVTE 276  Agrobacterium tum...
139867    236 INDY-----NTEVPSKRDDLYNLVKDLLEQGVpIDGVGHQSH--------IQIGwPSIEDTRASFEKFTSL-GLDNQVTE 301  Bacillus halodurans
15004757  184 INEYg---iIGDPNAAANYVK-IINVLKSKGL-IDGIGIQCHy-------FNMDnVSVGTMNYVLNMLSNT-GLPIYVSE 250  Clostridium aceto...
15004819  184 INEYg---iIGDPNAAANYVK-IINVLKSKGL-IDGIGIQCHy-------FNMDnVSVGTMNSVLSTLSKT-GLPIYVSE 250  Clostridium aceto...
16127035  208 YNDYms--qEAGNEKHRYGVLKLLEGFRKRGTpVDALGVQSHigaenadsFTGFgKPQEKAWTAFLNDVTGmGYDLMVTE 285  Caulobacter cresc...
16127272  175 INDYn----LENNPTKRATFLRMVERLLKAGApIGGIGTQSH--------LGLDfTPPGMCRIALRDLASL-GLPIHVSE 241  Caulobacter cresc...
15642845  193 YNDYs----IEEINAKSNFVYNMIKELKEKGVpVDGIGFQMH--------IDYRgLNYDSFRRNLERFAKL-GLQIYITE 259  Thermotoga maritima
17231940  213 LNDFs----IEGDTWKSRYFLKMIEYLKNNGAkIDGAGIQSHl------wFSTNyPFDEKGFVGVLKRLKElEVKPVITE 282  Nostoc sp. PCC 7120
15889644  205 LNEYdvefaVEKSPAKRAAFRNLILELLEKGApINAVGLQGH--------LRGGwPIAKDELAAFTTEMRSyGLAVMVTE 276  Agrobacterium tum...
139867    236 INDY-----NTEVPSKRDDLYNLVKDLLEQGVpIDGVGHQSH--------IQIGwPSIEDTRASFEKFTSL-GLDNQVTE 301  Bacillus halodurans
15004757  184 INEYg---iIGDPNAAANYVK-IINVLKSKGL-IDGIGIQCHy-------FNMDnVSVGTMNYVLNMLSNT-GLPIYVSE 250  Clostridium aceto...
15004819  184 INEYg---iIGDPNAAANYVK-IINVLKSKGL-IDGIGIQCHy-------FNMDnVSVGTMNSVLSTLSKT-GLPIYVSE 250  Clostridium aceto...
16127035  208 YNDYms--qEAGNEKHRYGVLKLLEGFRKRGTpVDALGVQSHigaenadsFTGFgKPQEKAWTAFLNDVTGmGYDLMVTE 285  Caulobacter cresc...
16127272  175 INDYn----LENNPTKRATFLRMVERLLKAGApIGGIGTQSH--------LGLDfTPPGMCRIALRDLASL-GLPIHVSE 241  Caulobacter cresc...
15642845  193 YNDYs----IEEINAKSNFVYNMIKELKEKGVpVDGIGFQMH--------IDYRgLNYDSFRRNLERFAKL-GLQIYITE 259  Thermotoga maritima
17231940  213 LNDFs----IEGDTWKSRYFLKMIEYLKNNGAkIDGAGIQSHl------wFSTNyPFDEKGFVGVLKRLKElEVKPVITE 282  Nostoc sp. PCC 7120
2494333   609 LDMSVY--RDSSSnyp--eaPRTALIEQAHkMMQLFEIFKKYSNVITNVTFWGLKDDYSWRATRRNDW------------ 672  Thermotoga maritima
15889644  277 LDVMDQtlPTPEA-------ERDMLITG---QVREFLEAASAGGPLSSITTWGISDQYSWIRWAYPRRdgt--------a 338  Agrobacterium tum...
139867    302 LDMSLYgwPPTGAytsyddiPAELLQAQADrYDQLFELYEELAADISSVTFWGIADNHTWLDGRAREYnngv------gi 375  Bacillus halodurans
15004757  251 LDMTG---DDSTQ-------LARYQQK--------FPVLYQNPN-VKGITLWGYMQGQTWNSG----------------- 294  Clostridium aceto...
15004819  251 LDMTG---NDATQ-------LARYQQK--------FPVLYQNPN-VKGVTIWGYMQGQTWNSG----------------- 294  Clostridium aceto...
16127035  286 FDVHDKglPYDFG-------PRDAAVAAY---AKAYLDQMLSYRQTKEILAWGLVDKYSWLQGRWPRQdgq--------p 347  Caulobacter cresc...
16127272  242 LDISFGdkPETAPl------PKLLSRQADLaRELAQAYMDLPRAQRFAFTVWGVRDRDSWLRGANGERpw---------- 305  Caulobacter cresc...
15642845  260 MDVRI---PLSGS-------EEYYLKKQAEvCAKIFDICLDNPA-VKAIQFWGFTDKYSWVPGFFKGYg----------- 317  Thermotoga maritima
17231940  283 LDIIIDt-PLPDTi------EKLDQMVADS---YKRYLDLCFANGVDTIITWGITDRYSWIRHPDWMPqkfkanpsyhkf 352  Nostoc sp. PCC 7120
15889644  277 LDVMDQtlPTPEA-------ERDMLITG---QVREFLEAASAGGPLSSITTWGISDQYSWIRWAYPRRdgt--------a 338  Agrobacterium tum...
139867    302 LDMSLYgwPPTGAytsyddiPAELLQAQADrYDQLFELYEELAADISSVTFWGIADNHTWLDGRAREYnngv------gi 375  Bacillus halodurans
15004757  251 LDMTG---DDSTQ-------LARYQQK--------FPVLYQNPN-VKGITLWGYMQGQTWNSG----------------- 294  Clostridium aceto...
15004819  251 LDMTG---NDATQ-------LARYQQK--------FPVLYQNPN-VKGVTIWGYMQGQTWNSG----------------- 294  Clostridium aceto...
16127035  286 FDVHDKglPYDFG-------PRDAAVAAY---AKAYLDQMLSYRQTKEILAWGLVDKYSWLQGRWPRQdgq--------p 347  Caulobacter cresc...
16127272  242 LDISFGdkPETAPl------PKLLSRQADLaRELAQAYMDLPRAQRFAFTVWGVRDRDSWLRGANGERpw---------- 305  Caulobacter cresc...
15642845  260 MDVRI---PLSGS-------EEYYLKKQAEvCAKIFDICLDNPA-VKAIQFWGFTDKYSWVPGFFKGYg----------- 317  Thermotoga maritima
17231940  283 LDIIIDt-PLPDTi------EKLDQMVADS---YKRYLDLCFANGVDTIITWGITDRYSWIRHPDWMPqkfkanpsyhkf 352  Nostoc sp. PCC 7120
2494333   673 --PLIFDKDHQAKLAYWAIVapEVLPPLP 699  Thermotoga maritima
15889644  339 nrPLPLDWSFNEKPMMAVIN--EFRNRGA 365  Agrobacterium tumefaciens str. C58 (Cereon)
139867    376 daPFVFDHNYRVKPAYWRII--D------ 396  Bacillus halodurans
15004757  295 --TYLVNSNGTERPALKWLR--SYLASH- 318  Clostridium acetobutylicum
15004819  295 --TYLVNSNGTERPALKWLR--SYLASH- 318  Clostridium acetobutylicum
16127035  348 krPTLYDDTYQPKPLREAVAaaLKAAPAR 376  Caulobacter crescentus CB15
16127272  306 ehPLPLDDAGQPKPMFQALA--EVLSG-- 330  Caulobacter crescentus CB15
15642845  318 -kALLFDENYNPKPCYYAIK--EVLEKKI 343  Thermotoga maritima
17231940  353 lrPLPYDENLKPKLARKAIAqaFIKATSS 381  Nostoc sp. PCC 7120
15889644  339 nrPLPLDWSFNEKPMMAVIN--EFRNRGA 365  Agrobacterium tumefaciens str. C58 (Cereon)
139867    376 daPFVFDHNYRVKPAYWRII--D------ 396  Bacillus halodurans
15004757  295 --TYLVNSNGTERPALKWLR--SYLASH- 318  Clostridium acetobutylicum
15004819  295 --TYLVNSNGTERPALKWLR--SYLASH- 318  Clostridium acetobutylicum
16127035  348 krPTLYDDTYQPKPLREAVAaaLKAAPAR 376  Caulobacter crescentus CB15
16127272  306 ehPLPLDDAGQPKPMFQALA--EVLSG-- 330  Caulobacter crescentus CB15
15642845  318 -kALLFDENYNPKPCYYAIK--EVLEKKI 343  Thermotoga maritima
17231940  353 lrPLPYDENLKPKLARKAIAqaFIKATSS 381  Nostoc sp. PCC 7120
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