Conserved Protein Domain Family
Imp

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COG2358: Imp 
TRAP-type uncharacterized transport system, periplasmic component [General function prediction only]
Statistics
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PSSM-Id: 225233
View PSSM: COG2358
Aligned: 21 rows
Threshold Bit Score: 256.497
Threshold Setting Gi: 15599043
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16329357   1 MVVIALFPLVFVGCTTR---------------------KPATVTLSTGNGLSAYVRIGQQIQESAAT---VDL---VVVD 53  Synechocystis sp. P...
11498593   9 CLIVIGVFLAGCAAEEKpegat------------tpkvEVKPWSWATCDPSCYAYRVVTGIFDAVKDd--VPG---YEFS 71  Archaeoglobus fulgidus
14602136  18 QAPAATPTETQTGVGETtts---------------peaEKLVIRWGTSRVGSSGYKALTTLAQVLNR---EIPe--IEIV 77  Aeropyrum pernix
15613164  13 IVGVSLLVTAACGGGSDstgadea-------geveekeRPSSVVIGTASQGGVYYIYGGGLAQLLDR---ELG---VSSN 79  Bacillus halodurans
15615499  14 SLGLILGACGGNADTDAeepagddpadtgeeqeeaagdHLTDLQLGTGSTGGTYYPLGQEIANVLNAnvdYDG---FNVS 90  Bacillus halodurans
15600738   4 SRRFGLFTLAATVTFSTsv-----------------faAPTFINILTGGTSGVYYPIGVGLSQIYGHd--IQG---AKTS 61  Pseudomonas aerugin...
15603443  15 LFALSLSACDDKKTATVstassnnpt---taaetpvsvQSKFVTIATGGASGPYNIIATTLSDIYSKs-lKTN-----SK 85  Pasteurella multocida
15892182  18 MNNFKLATIISIFLICSni-----------------yaAPKVIKIGTGSILKGYYAIGLDLCKTITNd--DKNnehITCE 78  Rickettsia conorii
15604070   1 MNNLKLVTIISIFFICSni-----------------yaAPKIIKIGTGSILKGYYAIGLDLCKTITNd--YKNnehIKCE 61  Rickettsia prowazekii
15600914  19 QKRLTQTLLAAITSFGLigga--------------yaaEERSYILATASTGGTYYPVGVALATLTKVk--LTPsyhFSLS 82  Vibrio cholerae
16329357  54 NKDSQGSQQNLQRLLDGEVDFAMVQLDVASEAMKAGDVAA-----------VAILTEEYAHIVGRKNQN----VNTLRDL 118 Synechocystis sp. P...
11498593  72 VKPYSSTTAAIKGFCNGEAESAYIADLAAKNLYESTGSFEgfvceqkpvqtFWAYTMETFLVTTKENAEn---IRSWSDL 148 Archaeoglobus fulgidus
14602136  78 VEPQSGAIASMKGFAKGDLDGAYGADIAFKEMYTSTGRFEgftadrlpvqtLWVFTIDIGLAVPKDRADe---FKCWSDF 154 Aeropyrum pernix
15613164  80 VEVTGGPVHNMQLVNEQEQDIGMITMGPGYEGVLGEGEWTggety-dnvrvIFPMYTTPFHWWSLESSG----VTSIEDM 154 Bacillus halodurans
15615499  91 AVASGASVDNLGQIFRGEMQLGMTVHIPALQAIAGEGDFEgavvd--nfgfLGYIYPEVMQVVTTEDTG----ITSIEDL 164 Bacillus halodurans
15600738  62 VQATKASVENLNLLQAGRGELALALGDSVADAWNGVADAGfkapl-kklraIGNTYPNYIQVVASQASG----IKTLADL 136 Pseudomonas aerugin...
15603443  86 TQTTGASVENLNLMAQKKVEMAFVMSDALNDALNGTGSFPakle---nvtqMAALYPNYVQIVTSKRSG----IKTITDL 158 Pasteurella multocida
15892182  79 VVATNGSIENLKLLQQGKIDLALVQANIAVEAYEGIGYYHdqekm-qnlrqVLNLHDEFFTVIVKDEDT----IKGFADI 153 Rickettsia conorii
15604070  62 VVITNGSIENLKLLQQGKIDLALVQANIAVEAYEGIGYYHnqekm-qnlrqVLNLHDEFFTVIVRDDNR----IKVFADI 136 Rickettsia prowazekii
15600914  83 AISSAGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGPYAerqn---qlrsVSMLWQNVEHFIVRSDLAptgtIADLASM 159 Vibrio cholerae
16329357 119 EGKKVSIGPPASGINFTATRLFDSTNLTIQPYTQ--LGLSMGLQNFVAPNSPLDAM--VYVGPFKASDEvREQLTIVe-N 193 Synechocystis sp. P...
11498593 149 DGKSVYLTPAGYMNHLNLRRAFAVLGVEPQHTEVdsKFVCKA-----LEEGTIVATglYTTAGVSLPTWgQELTIACkdK 223 Archaeoglobus fulgidus
14602136 155 DGKTIFTLPLGWDTGTALRNALDALGINYNHKELdlEAVATS----LSRGDIVATG--VYVTGERSVAP-WIQNMLAqiD 227 Aeropyrum pernix
15613164 155 DGMRVGVGPSGGTSGTYLPIIHEVLGLDITPVLA-----GANDMVSQQLDGQLDVI--GFAAGLPIPAV-AEVEAQR--D 224 Bacillus halodurans
15615499 165 KGKRVAIGPAGSATQSAARLILEAHGIEDGDYEAfeEGFGDA--AARIQDGQLDAS--FGLLGLPDSTT-SELSLQR--E 237 Bacillus halodurans
15600738 137 KGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKv-EYLPYAESVELIKNRQLDAT--LQSSGLGMAAI-RDLASTM--P 210 Pseudomonas aerugin...
15603443 159 KGKRVATGAQNSGVEVNARNLLAGFGITYSDINVdyLGYAEA--ADALKAGSIDAA--FLTSGLPNSSL-LELQQSF--D 231 Pasteurella multocida
15892182 154 DGKKITNGPAFSSSHITYDIVRSLYKFAKEPEELh-INYEDS--SDQLCNKEIDAI--IMMVGHSNPLV-NLIANKC--K 225 Rickettsia conorii
15604070 137 DGKKITNGPEFSSSNITYDTIRSLYKFSNESAELn-INYEDS--IDKFCNNEIDAI--IMMIGHFNPLV-NLISHKC--K 208 Rickettsia prowazekii
15600914 160 KGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFNLayLGYGGS--ASALQNGTIDGM--NTPAGVPVGAV-TQAFAAMgnD 234 Vibrio cholerae
16329357 194 VDFVPLSESFINYLTLQfPESYRKAYIPQGTYRALPPFpsedILTISTGGALLTRPN--MNREKVALMTWAIFANSRQFA 271 Synechocystis sp. P...
11498593 224 LVVIKMSDEEKQKIMAK----YGVKEIDVSKW-GIEGT----ADAVPFYFGFHTSLN--TPEDAVYNLLKALEKNSDKLA 292 Archaeoglobus fulgidus
14602136 228 LVVVNPCPEEIDKLEQA-G--IPVARVSANTFPEPVGV----DEFVGVRIFYGFHTGlnLSEDIVYKIIKTTYDNIDELA 300 Aeropyrum pernix
15613164 225 IHLFGIDGENRDKVLEA-LPYFEPYTIPADTYDQLDED----LETIAMFNFGITYSE--MNADFVYELVKAYHENNDLLM 297 Bacillus halodurans
15615499 238 VVILPIEGDALAYVEEN--SDYGAYEIDAGAYDFLDDS----VSTVTAYAILVASLDq-VSEDLGYEIVKALYENAGGIT 310 Bacillus halodurans
15600738 211 ITFVAIPADVVAKIDSP---AYHAASIPAGTYDGQEQD----VPTVAIDNILVSHSG--VSDELAYQMTKLMFDNLPRLV 281 Pseudomonas aerugin...
15603443 232 LQLVAIPVEGVQKLAES-KPYFNAMEIPANTYGNEEP-----IPTAAIKNALVVRKD--MSEADVYLLTKTFFDSLAQLQ 303 Pasteurella multocida
15892182 226 IDFISIDNDKITELIKQ-NRAFHKAILHKGLYPGITDN----QTTVKVSAILVTRDE--ANRDILDKFIGAFHRNVANFK 298 Rickettsia conorii
15604070 209 INFVSIENDKITELIKK-NRAFNKAILNKNLYPGITDN----HTTVKVSAILVTRDE--VNGYILDKFIGAFHRNVANFK 281 Rickettsia prowazekii
15600914 235 IKILSFTDEQIKQANGN-YNLWTKFDIPANTYPGVDKT----ITTIAQPNFLAVRTD--ISEEDVYQLTKAMYENLAFLQ 307 Vibrio cholerae
16329357 272 SFYPKLATENG------SVNLYEG---LLYIHPAAMRTYREGDPRIA 309 Synechocystis sp. PCC 6803
11498593 293 QVDPGLEPLAKnvaefqVGGIKSAdpsVMPIHPGLAKYLKEKGLWNS 339 Archaeoglobus fulgidus
14602136 301 SLDPAFSQLKEdfvgfqVQAIESLa-dLVPVHPGLAKFLKEMGAWKE 346 Aeropyrum pernix
15613164 298 TTHSSAEEAVP-------EAILRNe--VVPLHVGAIRYYEEIGIDLP 335 Bacillus halodurans
15615499 311 --HPQGEHMK-------MENILNGs-eGLPIHPGAQKYFQEQGISE- 346 Bacillus halodurans
15600738 282 TAHAAAKDIA-------LDKAAKNl--PIPLHPGAERFYKEKGVLPE 319 Pseudomonas aeruginosa PA01
15603443 304 TAHQAAKAVS-------LEGAQQGl--VAPLHPGAQKYYDEVSKK-- 339 Pasteurella multocida
15892182 299 LSNYLLNNLDI------NYFADTKn-fVLPKHDSVRNKN-------- 330 Rickettsia conorii
15604070 282 LSNYLLNNLDI------HYFADTKn-fVLPKHHSVRNKN-------- 313 Rickettsia prowazekii
15600914 308 GIHKATKDMA-------IEKAIEGl--PMPLHAGAARYYQEVGIKIP 345 Vibrio cholerae
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