Conserved Protein Domain Family
FocA

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COG2116: FocA 
Formate/nitrite transporter FocA, FNT family [Inorganic ion transport and metabolism]
Statistics
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PSSM-Id: 225027
View PSSM: COG2116
Aligned: 34 rows
Threshold Bit Score: 184.008
Threshold Setting Gi: 15833472
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
731592     3 DDSNYLTPHETALAVVAT---AMKKARLQLDTLLINSILGGVLFSSGSFLLVAVYSEDPDIVARNpgiVNLITGVNFAMG 79  baker's yeast
15832484  27 EIDEDRLPSRAMAIHEHIrqdGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPG-----SFLLENLGYTFG 101 Escherichia coli O1...
15926006   7 KWDKIFYGDDWVNNVVETirtKDILQSVYLKRYLLRAMMAGFIIGIITVFVLSVKATHEPDLPPGi--VNMASAITFSFA 84  Staphylococcus aure...
15927981   7 TVEDTYSTGAIVDSISSSvqmKQVMVQQTPGRYMLKAMMAGFLLSIVTVFMFGIKTQFANTHVDGl--INLMGAIAFSLG 84  Staphylococcus aure...
15901077   1 -----MVSSEFISKIEFAcnkKESLYSQSKFKYAIRSMFAGAFLTFSTAAGAVGADLINKIAPGS---GRFLFPFVFAWG 72  Streptococcus pneum...
16765720  30 EVDEDRLPSRAMAIHEHIrqdGEKEMERDAMALLWSAIAAGLSMGASLLAKGIFHVQLESVPG-----GFLLENLGYTFG 104 Salmonella typhimur...
16120502   1 ---MYTDTINKCAANAAR---IVKLAKESPLGFWIGSAMAGAYVGLGIILIFTLGNLIDPA---L---RPLVMGATFGLA 68  Yersinia pestis
15802893  27 EIDEDRLPSRAMAIHEHIrqdGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPG-----SFLLENLGYTFG 101 Escherichia coli O1...
16799677   1 ---MDVESSPLMQKIDYStrkKIDLVNNSILRYIVRAMLACLFLTLGTAVAVMIGDKVDHFAPGL---GKITYAFMFSWS 74  Listeria innocua
586613    27 EIDEDRLPSRAMAIHEHIrqdGEKELERDAMALLWSAIAAGLSMGASLLAKGIFQVELEGVPG-----SFLLENLGYTFG 101 Escherichia coli
731592    80 LFYVVMMGADLFNSNILFFSVGVLRKAVTI--YDLMISWVVSWLGNIAGSLFVSYLFgHLSG--ISSQKLWIIGSRQIIE 155 baker's yeast
15832484 102 FIIVIMARQQLFTENTVTAVLPVMQKPTMSnvGLLMRLWGVVLLGNILGTGIAAWAFeYMPIfnEETRDAF--VKIGMDV 179 Escherichia coli O1...
15926006  85 LVLILFTNSELLTSNFMYFTVGLYYKVIKP--TRVLKIFLLCFAGNILGAAILFSFM-RFSN--VMTPDMLNQLSAVIEH 159 Staphylococcus aure...
15927981  85 LILVVLTNSELLTSNFMYFTVGWYYKVVSV--KKMTWILLYCFLGNILGGFVLFFLMkFAHV---MTPEMTQALTALVQK 159 Staphylococcus aure...
15901077  73 LAYIVFLNAELVTSNMMFLTAGSFLKKISW--RKTAEILLYCTLFNLIGALIAGWGFaHSAA---YANLTHDSFISGVVE 147 Streptococcus pneum...
16765720 105 FIIVIMARQQLFTENTVTAVLPVMQNPTLSnvGLLMRLWGVVLLGNLIGTGVAAWAFeYMPIfdEETRDAF--VKIGMEV 182 Salmonella typhimur...
16120502  69 LTLVIIAGSELFTGHTMFLTFGVKAGTIKS--SQMWAVLPQTWLGNLLGSVFVALLY-YYGGgnLLSVDTS--LVHTAAL 143 Yersinia pestis
15802893 102 FIIVIMARQQLFTENTVTAVLPVMQKPTMSnvGLLMRLWGVVLLGNILGTGIAAWAFeYMPIfnEETRDAF--VKIGMDV 179 Escherichia coli O1...
16799677  75 LVMIIYMNAELGTSNMMYMTTGVYQKIVKP--GKALQILILCIVCNLLGGILAGYLV-SLTS--VFHNLPADHFLFTAVS 149 Listeria innocua
586613   102 FIIVIMARQQLFTENTVTAVLPVMQKPTMSnvGLLIRLWGVVLLGNILGTGIAAWAFeYMPIfnEETRDAF--VKIGMDV 179 Escherichia coli
731592   156 QKVSYSFVQTFLKGIACNFFVCLAIYLQLMAKPIHVKFILMSFPIIDFIGIGFTHVVGDMSAS-----FIAMLNGANVSV 230 baker's yeast
15832484 180 MKNTP--SEMFANAIISGWLIATMVWMFPA--AGAAKIVVIILMTWLIALGDTTHIVVGSVEIl-----YLVFNGTLHWS 250 Escherichia coli O1...
15926006 160 KTLSTGFVSILMKAIFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFmg---gLIYQVDTLHFI 236 Staphylococcus aure...
15927981 160 KTVDSTWLNIFTKGIFCNFFINIGIFISMQFKGGLTKAFFIACGVVVFVYMGYEHVVFNAGLYa---gMVFFNLDAVSWL 236 Staphylococcus aure...
15901077 148 MKLGRSNELVLLEAILANIFVNIAILSFILVKDGGAKLWLVLSAIYMFVFLTNEHIAANFASFa----IVKFSVAADSIA 223 Streptococcus pneum...
16765720 183 MKNSP--TEMFANAIISGWIIATMVWMFPA--AGGAKIVVIILMTWLIALGDTTHIVVGSVEIl-----YLVFNGTLPWS 253 Salmonella typhimur...
16120502 144 AKTTAPAMTLFFKGVLCNWLVCLAIWMAIR-VEGAAKFIAIWWCLLAFIASGYEHSVAN--MTllalsWFGHHSEAYTLS 220 Yersinia pestis
15802893 180 MKNTP--SEMFANAIISGWLIATMVWMFPA--AGAAKIVVIILMTWLIALGDTTHIVVGSVEIl-----YLVFNGTLHWS 250 Escherichia coli O1...
16799677 150 GKLEKAPLQIFVEGIFANIVVNTAVLCTLRMKDDAGKVIAMIFIIFIFAFLGFEHVIANFSSFs-----LAFFASGGTLA 224 Listeria innocua
586613   180 MKNTP--SEMFANAIISGWLIATMVWMFPA--AGAAKIVVIILMTWLIALGDTTHIVVGSVEIl-----YLVFNGTLHWS 250 Escherichia coli
731592   231 Gk---YIWKLLIPASLGNIVGGLFFSAVVPFYLHLVVVERDR 269 baker's yeast
15832484 251 D----FIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKR 288 Escherichia coli O157:H7
15926006 237 P-----AISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKN 273 Staphylococcus aureus subsp. aureus N315
15927981 237 H-----VLKNIVFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQ 273 Staphylococcus aureus subsp. aureus N315
15901077 224 NfgvgNMLRHWGVTFIGNFIGGGLLMGLPYAFLNKNEDTYVD 265 Streptococcus pneumoniae TIGR4
16765720 254 D----FLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKR 291 Salmonella typhimurium LT2
16120502 221 G-----IGHNLLWVTLGNTLSGAVFMGLGYWYATPRAQRPQP 257 Yersinia pestis
15802893 251 D----FIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKR 288 Escherichia coli O157:H7 EDL933
16799677 225 AmtagNVTVNLVLALLGNFVGGGLVIGLGYAWLNRTKSIYKD 266 Listeria innocua
586613   251 D----FIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKR 288 Escherichia coli
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