Conserved Protein Domain Family
FocA

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COG2116: FocA 
Formate/nitrite transporter FocA, FNT family [Inorganic ion transport and metabolism]
Statistics
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PSSM-Id: 225027
View PSSM: COG2116
Aligned: 34 rows
Threshold Bit Score: 184.008
Threshold Setting Gi: 15833472
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731592     3 DDSNYLTPHETALAVVAT---AMKKARLQLDTLLINSILGGVLFSSGSFLLVAVYSEDPDIVARNpgiVNLITGVNFAMG 79
gi 15832484  27 EIDEDRLPSRAMAIHEHIrqdGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPG-----SFLLENLGYTFG 101
gi 15926006   7 KWDKIFYGDDWVNNVVETirtKDILQSVYLKRYLLRAMMAGFIIGIITVFVLSVKATHEPDLPPGi--VNMASAITFSFA 84
gi 15927981   7 TVEDTYSTGAIVDSISSSvqmKQVMVQQTPGRYMLKAMMAGFLLSIVTVFMFGIKTQFANTHVDGl--INLMGAIAFSLG 84
gi 15901077   1 -----MVSSEFISKIEFAcnkKESLYSQSKFKYAIRSMFAGAFLTFSTAAGAVGADLINKIAPGS---GRFLFPFVFAWG 72
gi 16765720  30 EVDEDRLPSRAMAIHEHIrqdGEKEMERDAMALLWSAIAAGLSMGASLLAKGIFHVQLESVPG-----GFLLENLGYTFG 104
gi 16120502   1 ---MYTDTINKCAANAAR---IVKLAKESPLGFWIGSAMAGAYVGLGIILIFTLGNLIDPA---L---RPLVMGATFGLA 68
gi 15802893  27 EIDEDRLPSRAMAIHEHIrqdGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPG-----SFLLENLGYTFG 101
gi 16799677   1 ---MDVESSPLMQKIDYStrkKIDLVNNSILRYIVRAMLACLFLTLGTAVAVMIGDKVDHFAPGL---GKITYAFMFSWS 74
gi 586613    27 EIDEDRLPSRAMAIHEHIrqdGEKELERDAMALLWSAIAAGLSMGASLLAKGIFQVELEGVPG-----SFLLENLGYTFG 101
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731592    80 LFYVVMMGADLFNSNILFFSVGVLRKAVTI--YDLMISWVVSWLGNIAGSLFVSYLFgHLSG--ISSQKLWIIGSRQIIE 155
gi 15832484 102 FIIVIMARQQLFTENTVTAVLPVMQKPTMSnvGLLMRLWGVVLLGNILGTGIAAWAFeYMPIfnEETRDAF--VKIGMDV 179
gi 15926006  85 LVLILFTNSELLTSNFMYFTVGLYYKVIKP--TRVLKIFLLCFAGNILGAAILFSFM-RFSN--VMTPDMLNQLSAVIEH 159
gi 15927981  85 LILVVLTNSELLTSNFMYFTVGWYYKVVSV--KKMTWILLYCFLGNILGGFVLFFLMkFAHV---MTPEMTQALTALVQK 159
gi 15901077  73 LAYIVFLNAELVTSNMMFLTAGSFLKKISW--RKTAEILLYCTLFNLIGALIAGWGFaHSAA---YANLTHDSFISGVVE 147
gi 16765720 105 FIIVIMARQQLFTENTVTAVLPVMQNPTLSnvGLLMRLWGVVLLGNLIGTGVAAWAFeYMPIfdEETRDAF--VKIGMEV 182
gi 16120502  69 LTLVIIAGSELFTGHTMFLTFGVKAGTIKS--SQMWAVLPQTWLGNLLGSVFVALLY-YYGGgnLLSVDTS--LVHTAAL 143
gi 15802893 102 FIIVIMARQQLFTENTVTAVLPVMQKPTMSnvGLLMRLWGVVLLGNILGTGIAAWAFeYMPIfnEETRDAF--VKIGMDV 179
gi 16799677  75 LVMIIYMNAELGTSNMMYMTTGVYQKIVKP--GKALQILILCIVCNLLGGILAGYLV-SLTS--VFHNLPADHFLFTAVS 149
gi 586613   102 FIIVIMARQQLFTENTVTAVLPVMQKPTMSnvGLLIRLWGVVLLGNILGTGIAAWAFeYMPIfnEETRDAF--VKIGMDV 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731592   156 QKVSYSFVQTFLKGIACNFFVCLAIYLQLMAKPIHVKFILMSFPIIDFIGIGFTHVVGDMSAS-----FIAMLNGANVSV 230
gi 15832484 180 MKNTP--SEMFANAIISGWLIATMVWMFPA--AGAAKIVVIILMTWLIALGDTTHIVVGSVEIl-----YLVFNGTLHWS 250
gi 15926006 160 KTLSTGFVSILMKAIFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFmg---gLIYQVDTLHFI 236
gi 15927981 160 KTVDSTWLNIFTKGIFCNFFINIGIFISMQFKGGLTKAFFIACGVVVFVYMGYEHVVFNAGLYa---gMVFFNLDAVSWL 236
gi 15901077 148 MKLGRSNELVLLEAILANIFVNIAILSFILVKDGGAKLWLVLSAIYMFVFLTNEHIAANFASFa----IVKFSVAADSIA 223
gi 16765720 183 MKNSP--TEMFANAIISGWIIATMVWMFPA--AGGAKIVVIILMTWLIALGDTTHIVVGSVEIl-----YLVFNGTLPWS 253
gi 16120502 144 AKTTAPAMTLFFKGVLCNWLVCLAIWMAIR-VEGAAKFIAIWWCLLAFIASGYEHSVAN--MTllalsWFGHHSEAYTLS 220
gi 15802893 180 MKNTP--SEMFANAIISGWLIATMVWMFPA--AGAAKIVVIILMTWLIALGDTTHIVVGSVEIl-----YLVFNGTLHWS 250
gi 16799677 150 GKLEKAPLQIFVEGIFANIVVNTAVLCTLRMKDDAGKVIAMIFIIFIFAFLGFEHVIANFSSFs-----LAFFASGGTLA 224
gi 586613   180 MKNTP--SEMFANAIISGWLIATMVWMFPA--AGAAKIVVIILMTWLIALGDTTHIVVGSVEIl-----YLVFNGTLHWS 250
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 731592   231 Gk---YIWKLLIPASLGNIVGGLFFSAVVPFYLHLVVVERDR 269
gi 15832484 251 D----FIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKR 288
gi 15926006 237 P-----AISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKN 273
gi 15927981 237 H-----VLKNIVFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQ 273
gi 15901077 224 NfgvgNMLRHWGVTFIGNFIGGGLLMGLPYAFLNKNEDTYVD 265
gi 16765720 254 D----FLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKR 291
gi 16120502 221 G-----IGHNLLWVTLGNTLSGAVFMGLGYWYATPRAQRPQP 257
gi 15802893 251 D----FIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKR 288
gi 16799677 225 AmtagNVTVNLVLALLGNFVGGGLVIGLGYAWLNRTKSIYKD 266
gi 586613   251 D----FIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKR 288
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