1LBI


Conserved Protein Domain Family
PurR

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COG1609: PurR 
DNA-binding transcriptional regulator, LacI/PurR family [Transcription]
linked to 3D-structure
Statistics
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PSSM-Id: 224525
View PSSM: COG1609
Aligned: 277 rows
Threshold Bit Score: 41.5258
Threshold Setting Gi: 16124768
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1LBI_A     4 VTLYDVAEYAGVSYQTVSRVVNQAS---HVSAKTREKVEAAMAELNYI-PNRVAQQLAGKqslLIGVATS---------- 69  Escherichia coli
3025303    2 ATLSDVAKKANVSKMTVSRVINHPE---TVTDELKKLVHSAMKELNYI-PNYAARALVQN---RTQVVKLlil----eem 70  Bacillus subtilis
15896789   2 STIKDVAKLSGVSPSTVSIILNGNAskrNISERTQRKVMDSVKKLNYH-PNIAARKLRSK---NSQSKPTialywssdis 77  Clostridium acetobu...
16124768     -------------------------------------------------------------------------------- Caulobacter crescen...
19704803   2 ITQKELAARLGVSRTTIARAINNSP---NIKPETKEKILKLVKELGYE-KNYVGSLLASK---KKIVYSFive----srn 70  Fusobacterium nucle...
15829093   5 STYEEIAKKAKVSVSTVSRFYNNG----YVSEKNKNKINEIVLQHDLGvKHFTRINKKMN----NQIYFLihn----wtd 72  Mycoplasma pulmonis
15901650   9 VTIYDIARLSGFSPKTVSRVINGGVn---VKEETYQAIQKVIEELSYI-PNAYAKNLTKK---EAINILIsvk----kid 77  Streptococcus pneum...
15675250   6 ITIKDIAREAGVSVATVSYVLNQRNd-qKISEETRNKVLHISNLLNYT-PNQAARSLVTQ---QSNSVVLy--------- 71  Streptococcus pyoge...
16122719   8 ATIVDIARRANVTNITVSRTFNQPG---LVKQETREKIHAIAKELNYV-PNAFAQGLKRS---SSQIIGIvts----smy 76  Yersinia pestis
16801298   2 ATLADVAKRANVSKMTVSRVINHPD---QVSDELKMLVYSAMEALEYV-PNYAARALVQN---RTQVIKFlil----eei 70  Listeria innocua
1LBI_A    70 SlalHAPSQIVAAIKSRADQLGASVVVSMVERs--GVEACKTAVHNLLAQRVSGLIINYp-LDDQDAIAVEAACT--NVP 144 Escherichia coli
3025303   71 DttePYYMNLLTGISRELDRNHYALQLVTRNSl-------------NIG-QCDGIIATG--LRKND-FEGVIKAF--EKP 131 Bacillus subtilis
15896789  78 Vn---IISRFLRGLQSKLAKQNYNYNVVICPY---KTDCLHLEKGISKENSFDAAIIAN----ISNYDLEYLNKAslTLP 147 Clostridium acetobu...
16124768     -------------------------------------------------------------------------------- Caulobacter crescen...
19704803  71 SyytEQIKLGIKGAKKEYKHYNLEIIEIVTNInkpMEQVLKLKKLLNSDKQIDGIIIIP---LDKTKILELINPYleRIK 147 Fusobacterium nucle...
15829093  73 N----DTLNIIAASNTFSNVHNKSIYITNCSAq--TQELISKMVEILIKKPYAIVLFFP---IVNDSLIDFINKLstETK 143 Mycoplasma pulmonis
15901650  78 SfplIWFHTLLDKVLRTCKEFGVNAIVEYFGE----EDTISNSIISSTGSLVDGVIVFY--ESVDDIRIQYLKKN--HMP 149 Streptococcus pneum...
15675250  72 ---yKYADSILARAEQLHTISFLSRLLHEQDY----QLVCLNEDSTEKFDWADLILTLD---VDNDTFYKIGKLN--FKP 139 Streptococcus pyoge...
16122719  77 N---PFYSELIQTVSRIARTQCYQIMLFDTDG---SEEAEMEAIQALFGYKACGILLSPvrDDKNYQPAYLDLAEtyRVP 150 Yersinia pestis
16801298  71 DtvePYYMNLLTGISRELDKYYYSLQLVTQRSr-------------NIG-AYDGLIVTG--IRDKD-YELGLLDI--DKP 131 Listeria innocua
1LBI_A   145 ALFLD---VsdQTPINSIIFSHEDGTRLGVEHLVALG--HQQIALLAGPLsSVSA-RLRLAGWHKYL--TRNQiqPIAER 216 Escherichia coli
3025303  132 LVVFGqneMg----YDFIDVNNEKGTFMATRHVMGLG--EREVVFFGIDl-DEPFeRAREQGYIRAMnkSFKKsnMFRID 204 Bacillus subtilis
15896789 148 IILFNrlsN----KYSSVNVDNYKMGEKASLLFAKKR--YKSAAAILTES-LNDAmDNRNKGFIETChkNGIKisENHII 220 Clostridium acetobu...
16124768     -------------------------------------------------------------------------------- Caulobacter crescen...
19704803 148 FITVSvflS---KKIAYVGTDYQKCGRLAAELLTKTLnsNDKVLVIDNGD-DNISsKYYLNGFLDRAnnDKMN----IVG 219 Fusobacterium nucle...
15829093 144 IVIYGeknP----KVNSIFIDYKKMIYSLGNIFLERNn-KDKLALIIDSNlESKIsKQQIEGFISFCeqKQIS---CYLK 215 Mycoplasma pulmonis
15901650 150 FLVFGesqT---SGVVYVSNNNFQATYDMMKAVTEEK--FKNMWLLMGGE--SHVnKDRERGVRSFLndKNYFm-DLKVI 221 Streptococcus pneum...
15675250 140 LIAIDsfvN--DPLFFQINTDYAALKDQANQFFKD-----EPYTLLSLP----ITnRERYEHVS------------AFFP 196 Streptococcus pyoge...
16122719 151 LILIDrdiYn--RQLSGVFLNNKEIGLLAGKYLSEQP--ERKMLIIGGPA-ESEItRVRIEGIINALenKKND---VHII 222 Yersinia pestis
16801298 132 VIFYGenkRg----YDSIDVDNKKGTALATEHVVEIG--FSRIVFLGIDLlDEQFmKSRLEGYEEVVrkHGLEpeSYFIA 205 Listeria innocua
1LBI_A   217 EGDW-SAMSGFQQTMQMLNEGIV---PTAMLVANDQMALGAMRAITESGLR-VGA--DISVVGYDD-TEDSSCYIPPLTT 288 Escherichia coli
3025303  205 NSSKkSECLARE----LL---KSmdnQAAFVCASDRIALGVIRAAQSLGKRiPED---VAVTGNDGv-FLDRISSPRLTT 273 Bacillus subtilis
15896789 221 AAEN-SIHGGVDAAKKLMKLKNT---PKALFCNSDSIALGVISVLNKRQIS-IPDdiEIVAIGMND-REYTEFSTPPVTI 294 Clostridium acetobu...
16124768   1 -----MSRAVVDPSSKVSTRELN---LASCDSSGPFRAIAGSYCRFMVNSEtAPAp-DRGRLKMAD---IARMAGVSIST 68  Caulobacter crescen...
19704803 220 P----IKKNGVEESLQFLKTILKk--ENISSIFINRYAQDILLELSDNILKrQKN----ITTGIGNrIRKLIMERKILAT 289 Fusobacterium nucle...
15829093 216 YFDNrNFDSIKKLVKNLKKLEVE-----NVISSTHDVFLNLLVHQPEFNFF-------ISDIGYQS---IFDYNKKYFVK 280 Mycoplasma pulmonis
15901650 222 YGLS-TIDSVYSYAMQHLTTQNY---PDIIFVSGDEKVQGLIRACYEKGIL-IPD--DISIIGFDN-IPISQYYTPALST 293 Streptococcus pneum...
15675250 197 ----------------------------SLHIVNDLRELTYFEKENLLLIDeSLD--QFFVNSSQK-LYCPRFSPKKGQV 245 Streptococcus pyoge...
16122719 223 NGDY-DFISQEAAVRDYLSVPQNq--PDYIIGLNGILTLGAIAICHELKIY--NN---IKFFSIDE-PPKAADYGLHIAG 293 Yersinia pestis
16801298 206 NSSSvAEEKAFE----LL---RYnseKIAIVCASDRIAIGVVRAAAAFGRRfGEN---IAVTGFDGv-FLDRISSPKITT 274 Listeria innocua
1LBI_A   289 IKQDFRLLGQTSVDRLLQLSQ-GQAVKgNQ--LLPVSLVKRKTTLAPN 333 Escherichia coli
3025303  274 VRQPVVEMGEACAKMLLKKMNeDG-AA-QGslFFEPELIVRESTL--- 316 Bacillus subtilis
15896789 295 VDIPIEEMAGTCISLVEKLIN-RDIEN-PTsiLFDGPLILRNS----- 335 Clostridium acetobutylicum
16124768  69 VSRDLPLIFSSTRS---------------------------------- 82  Caulobacter crescentus CB15
19704803 290 VADDVYSTGYKACQLMVDMLY-KEFGKsVKkiILEPQILLMENLK--- 333 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
15829093 281 VFIDYHLLVLELARLLNNEQD-------IFslEISPKILIGK------ 315 Mycoplasma pulmonis
15901650 294 IAPNYVKLAKEMIEGVLAIIK-GES---VTsvEVSPKFVRRQSF---- 333 Streptococcus pneumoniae TIGR4
15675250 246 ILEAIEWAKKRQPDKKHNLLV--------------------------- 266 Streptococcus pyogenes M1 GAS
16122719 294 VYHDTQMLGEIAAELLFNAIK--KP---HNdqAVRREFFTGSLLTH-- 334 Yersinia pestis
16801298 275 VRSPVVEMGEELAKMLLAKINdHG-KP-QGnlLFTPELLIRASTTGKE 320 Listeria innocua
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