Conserved Protein Domain Family
HemD

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COG1587: HemD 
Uroporphyrinogen-III synthase [Coenzyme transport and metabolism]
Statistics
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PSSM-Id: 224503
Aligned: 57 rows
Threshold Bit Score: -1
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
17547075  21 APVVIVTRPRAQAPMLVAALERHGLRTLQFPLLDIAPTPNlddLRAALADPSRYALVVFVSPNAVQQAFAAMPEGFR--- 97  Ralstonia solanacearum
15614058 255 GHQVLIGRTTAEEGGLAKTLMEAGAEVFEFPRWHVTSKP----WEVTPGEVQEaDHLVFTSPHSVHFFFESLTEQR---- 326 Bacillus halodurans
1171663  255 GRHLMVVTHGEDEDPLADKLRDSGADLIEWPKWRTENMPv---NEEILRKIGTFEDVFFTSRRAVCEFFRALASQKId-i 330 Bacillus subtilis
15618433   1 -MTLYLGLNQKTARKYQAHYLPILT---LFPYAKSTPQ-----NKRALQFLPQATHVILTSPSSTHLFLSRMTSLLSk-a 70  Chlamydophila pneum...
15605160   1 -MPLYLGLNPSSAKQYSAVFQPIIR---IVPFSKHVPq-----IRHARKFLVSTSHILLTSPSSTACFFSSIRKRIPl-s 70  Chlamydia trachomatis
3122192    1 -MKVVITRPKERADVFASLLKKEGFEPIIFPTLEIVYN------KDLDVNLDSYDWIAFTSPSGVIGLYNILTENERe-- 71  Methanocaldococcus ...
17227783  15 GKRILVTAPRNYASRLSAQIICKGGLPILMPTIETCYLSNfskLDAVISSINEFDWIAFTSRNGIIAFFERLHNLDIsit 94  Nostoc sp. PCC 7120
17230942 261 GKTILVTRSSGQSSQFSDRLTTLGATVIEMPALEIGPPSSwkeLDQAIANLSHFDWLILTSTNGVDYFFERLYIQGKdtr 340 Nostoc sp. PCC 7120
16800233 250 htkVLLPRARAGKSMLAEKIRDLGGEVTMYPNIQVLDILP---TKTKAELCET-SELLFTSKEAVERFFDYLATLELdir 325 Listeria innocua
16331265 277 EKTILVTRAADQASQFTELLHQQGATVLAMAALEIVPPKDwqpLDQAIAKLGDFDWLILTSANGVEFFFQRLQHHGLdsr 356 Synechocystis sp. P...
15614058 255 GHQVLIGRTTAEEGGLAKTLMEAGAEVFEFPRWHVTSKP----WEVTPGEVQEaDHLVFTSPHSVHFFFESLTEQR---- 326 Bacillus halodurans
1171663  255 GRHLMVVTHGEDEDPLADKLRDSGADLIEWPKWRTENMPv---NEEILRKIGTFEDVFFTSRRAVCEFFRALASQKId-i 330 Bacillus subtilis
15618433   1 -MTLYLGLNQKTARKYQAHYLPILT---LFPYAKSTPQ-----NKRALQFLPQATHVILTSPSSTHLFLSRMTSLLSk-a 70  Chlamydophila pneum...
15605160   1 -MPLYLGLNPSSAKQYSAVFQPIIR---IVPFSKHVPq-----IRHARKFLVSTSHILLTSPSSTACFFSSIRKRIPl-s 70  Chlamydia trachomatis
3122192    1 -MKVVITRPKERADVFASLLKKEGFEPIIFPTLEIVYN------KDLDVNLDSYDWIAFTSPSGVIGLYNILTENERe-- 71  Methanocaldococcus ...
17227783  15 GKRILVTAPRNYASRLSAQIICKGGLPILMPTIETCYLSNfskLDAVISSINEFDWIAFTSRNGIIAFFERLHNLDIsit 94  Nostoc sp. PCC 7120
17230942 261 GKTILVTRSSGQSSQFSDRLTTLGATVIEMPALEIGPPSSwkeLDQAIANLSHFDWLILTSTNGVDYFFERLYIQGKdtr 340 Nostoc sp. PCC 7120
16800233 250 htkVLLPRARAGKSMLAEKIRDLGGEVTMYPNIQVLDILP---TKTKAELCET-SELLFTSKEAVERFFDYLATLELdir 325 Listeria innocua
16331265 277 EKTILVTRAADQASQFTELLHQQGATVLAMAALEIVPPKDwqpLDQAIAKLGDFDWLILTSANGVEFFFQRLQHHGLdsr 356 Synechocystis sp. P...
17547075  98 WPQDVPAAVVGPASAQALAAHGVAAPTYRVirpdshADDARQDSEALYARLDVatlsGREVLIVRGNGGR-------EWL 170 Ralstonia solanacearum
15614058 327 ---MDIRHIRGSFFAASKKSLKIIRSFACT----------AALLQELPAGG--------KTIIFGDEENE---------M 376 Bacillus halodurans
1171663  331 RQLTAKLSAASEQAKTELEKRGFLVTAIQP--------DSEKRLVVGSRH---------AVENMQKHESCs------FYI 387 Bacillus subtilis
15618433  71 TLKTKTYLCIGESTKERLLSFLGQVKYVVAt-----QEIAEGIFPLLQALPSS-----ARILYPHSSLAR-------PVI 133 Chlamydophila pneum...
15605160  71 LFRNKSFVTIGEATSSRVKAFLPKANIVQSa-----FPQAEAFLPILSTLPSS-----SSLLYPHSVLAR-------PIL 133 Chlamydia trachomatis
3122192   72 NVKNKKIAVIGEKTAKTFKKYFGRDPDIMPn-----EYTAESLLREIKKVSKE----EEKFLIPTTPSTR-------DVL 135 Methanocaldococcus ...
17227783  95 KLQNCQLCALGKDIDILLSLFG-KVDLIPD------ESSPAGIVAEFSQICGIr---EQKILVPVPEVIGipepnivPNF 164 Nostoc sp. PCC 7120
17230942 341 ALAGLKIAVVGEKTSQSLKQRGIQADFIPP------NFVADSLVEHFPESLLN----KKILFPRVESGGR-------EIL 403 Nostoc sp. PCC 7120
16800233 326 SLKNTHLTAIGKQTKEAFSEKGIIPDSFIK------RRSTELILEHIARFQKN-----ASNLIIGSVVDT--------AE 386 Listeria innocua
16331265 357 ALAGLKLAVVGKKTAQSLEKFGLKPDFIPP------DFIADALVEHFPHSPAG----LKILFPRVESGGR-------AQL 419 Synechocystis sp. P...
15614058 327 ---MDIRHIRGSFFAASKKSLKIIRSFACT----------AALLQELPAGG--------KTIIFGDEENE---------M 376 Bacillus halodurans
1171663  331 RQLTAKLSAASEQAKTELEKRGFLVTAIQP--------DSEKRLVVGSRH---------AVENMQKHESCs------FYI 387 Bacillus subtilis
15618433  71 TLKTKTYLCIGESTKERLLSFLGQVKYVVAt-----QEIAEGIFPLLQALPSS-----ARILYPHSSLAR-------PVI 133 Chlamydophila pneum...
15605160  71 LFRNKSFVTIGEATSSRVKAFLPKANIVQSa-----FPQAEAFLPILSTLPSS-----SSLLYPHSVLAR-------PIL 133 Chlamydia trachomatis
3122192   72 NVKNKKIAVIGEKTAKTFKKYFGRDPDIMPn-----EYTAESLLREIKKVSKE----EEKFLIPTTPSTR-------DVL 135 Methanocaldococcus ...
17227783  95 KLQNCQLCALGKDIDILLSLFG-KVDLIPD------ESSPAGIVAEFSQICGIr---EQKILVPVPEVIGipepnivPNF 164 Nostoc sp. PCC 7120
17230942 341 ALAGLKIAVVGEKTSQSLKQRGIQADFIPP------NFVADSLVEHFPESLLN----KKILFPRVESGGR-------EIL 403 Nostoc sp. PCC 7120
16800233 326 SLKNTHLTAIGKQTKEAFSEKGIIPDSFIK------RRSTELILEHIARFQKN-----ASNLIIGSVVDT--------AE 386 Listeria innocua
16331265 357 ALAGLKLAVVGKKTAQSLEKFGLKPDFIPP------DFIADALVEHFPHSPAG----LKILFPRVESGGR-------AQL 419 Synechocystis sp. P...
17547075 171 ADRLREAGVAVRTVEAYRRSVPVPDtAAWAALREVLAGRHAWTLTSSEAARNLDSLARASLSaae----veALYAAPCFA 246 Ralstonia solanacearum
15614058 377 KQKYPFEEASYVSTHQKTLVPQSLR---TCRRLLDEGRIETLVFPSAASVNAVIDGLEKCGEsv-----gtLSQVKTVIT 448 Bacillus halodurans
1171663  388 THENVIDDRFTHMIQRTISESPLHM-------VICPNKLSVQQLINGGEQIGILPEPSASRP--------------PIVC 446 Bacillus subtilis
15618433 134 REFLYNR-FTFFSYPHYTVKPRKLK-------KNILSKYKKIIFTSPSTVRAFAKIFPRFP-------------EKTYWC 192 Chlamydophila pneum...
15605160 134 RSLLQTLPFSSFSYPHYTVKPITLS-------VSTFLPHKTIILTSPSIVRAYAQLFPCLPD-------------KEHWC 193 Chlamydia trachomatis
3122192  136 KNNLNADLLFVYKSAEPENLKEDIK----KLKELIAKDKFILTFTSGLTAKNFFKYVDDEFAe--------IIKDNYIVA 203 Methanocaldococcus ...
17227783 165 IKDLEELGMQVIRVPAYITQSLDKDiYSVEINLIQQGLIDIIAFSSTAEIESFLAMFNSKSE----------FQHCVVAC 234 Nostoc sp. PCC 7120
17230942 404 VKELSAKGADVIEVAAYQSCCPTSI-PLAAELALKNRTIHIITFASSKTVQFFCQLADKIFPhni----pnALEGICIAS 478 Nostoc sp. PCC 7120
16800233 387 VSAILSEVKTTEMMPLYDMRPVTER-------PFDLESFEQICFSSSRSVQNLLDVLTTEEKa--------ILQTKTILS 451 Listeria innocua
16331265 420 VQELSQKQALVTEVPSYQSACPGHM-PEEVWQSIVNQTVDVITFASSKTVSHFRQLLAQTSQangyqdwrsLINHCQIAS 498 Synechocystis sp. P...
15614058 377 KQKYPFEEASYVSTHQKTLVPQSLR---TCRRLLDEGRIETLVFPSAASVNAVIDGLEKCGEsv-----gtLSQVKTVIT 448 Bacillus halodurans
1171663  388 THENVIDDRFTHMIQRTISESPLHM-------VICPNKLSVQQLINGGEQIGILPEPSASRP--------------PIVC 446 Bacillus subtilis
15618433 134 REFLYNR-FTFFSYPHYTVKPRKLK-------KNILSKYKKIIFTSPSTVRAFAKIFPRFP-------------EKTYWC 192 Chlamydophila pneum...
15605160 134 RSLLQTLPFSSFSYPHYTVKPITLS-------VSTFLPHKTIILTSPSIVRAYAQLFPCLPD-------------KEHWC 193 Chlamydia trachomatis
3122192  136 KNNLNADLLFVYKSAEPENLKEDIK----KLKELIAKDKFILTFTSGLTAKNFFKYVDDEFAe--------IIKDNYIVA 203 Methanocaldococcus ...
17227783 165 IKDLEELGMQVIRVPAYITQSLDKDiYSVEINLIQQGLIDIIAFSSTAEIESFLAMFNSKSE----------FQHCVVAC 234 Nostoc sp. PCC 7120
17230942 404 VKELSAKGADVIEVAAYQSCCPTSI-PLAAELALKNRTIHIITFASSKTVQFFCQLADKIFPhni----pnALEGICIAS 478 Nostoc sp. PCC 7120
16800233 387 VSAILSEVKTTEMMPLYDMRPVTER-------PFDLESFEQICFSSSRSVQNLLDVLTTEEKa--------ILQTKTILS 451 Listeria innocua
16331265 420 VQELSQKQALVTEVPSYQSACPGHM-PEEVWQSIVNQTVDVITFASSKTVSHFRQLLAQTSQangyqdwrsLINHCQIAS 498 Synechocystis sp. P...
17547075 247 PHARIVEQAQSLGFRD-VTLTGAGDDRLLAGVLAWAGPVA 285 Ralstonia solanacearum
15614058 449 FGPESSNAAKEAGFQV-DIQLEAPSAQLLIETLEAVRV-- 485 Bacillus halodurans
1171663  447 IGDDSAAGIYGFTAVQ--EQDELLAFIHNQHAEKKLLHT- 483 Bacillus subtilis
15618433 193 QGRMTLQEFQKFS-----SQKQVSLLETLGKSRTSP---- 223 Chlamydophila pneumoniae CWL029
15605160 194 LGEISAAEFKQIFH----TPPSKILFSTKEPTGC------ 223 Chlamydia trachomatis
3122192  204 IGPITAKVIEKFGFKP-LIPKVYTIEGMLEVIRTLKER-- 240 Methanocaldococcus jannaschii
17227783 235 FGPYTAANAEQLGLNVsIVSTDFSSFEGFVEAIVKFYIDS 274 Nostoc sp. PCC 7120
17230942 479 IGPQTSKTCHTLLGRV-DIEAEEYTLDGLTQAIIQWSLKP 517 Nostoc sp. PCC 7120
16800233 452 IGRFTSATLQSFGINE-FEEAENATPESLIELIQKTKLEG 490 Listeria innocua
16331265 499 IGPQTSERCLRELGRV-DIEATEYTLEGLTGAITNYVYQN 537 Synechocystis sp. PCC 6803
15614058 449 FGPESSNAAKEAGFQV-DIQLEAPSAQLLIETLEAVRV-- 485 Bacillus halodurans
1171663  447 IGDDSAAGIYGFTAVQ--EQDELLAFIHNQHAEKKLLHT- 483 Bacillus subtilis
15618433 193 QGRMTLQEFQKFS-----SQKQVSLLETLGKSRTSP---- 223 Chlamydophila pneumoniae CWL029
15605160 194 LGEISAAEFKQIFH----TPPSKILFSTKEPTGC------ 223 Chlamydia trachomatis
3122192  204 IGPITAKVIEKFGFKP-LIPKVYTIEGMLEVIRTLKER-- 240 Methanocaldococcus jannaschii
17227783 235 FGPYTAANAEQLGLNVsIVSTDFSSFEGFVEAIVKFYIDS 274 Nostoc sp. PCC 7120
17230942 479 IGPQTSKTCHTLLGRV-DIEAEEYTLDGLTQAIIQWSLKP 517 Nostoc sp. PCC 7120
16800233 452 IGRFTSATLQSFGINE-FEEAENATPESLIELIQKTKLEG 490 Listeria innocua
16331265 499 IGPQTSERCLRELGRV-DIEATEYTLEGLTGAITNYVYQN 537 Synechocystis sp. PCC 6803
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