Conserved Protein Domain Family
DnaC

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COG1484: DnaC 
DNA replication protein DnaC [Replication, recombination and repair]
Statistics
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PSSM-Id: 224401
View PSSM: COG1484
Aligned: 125 rows
Threshold Bit Score: 55.489
Threshold Setting Gi: 20090935
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15896822  32 EIKdkLPKIIKIDSEISRLCLKLSTNIFKKinnrdeYIKSLKNeitnlrmersellVSNGYPMDYLQMHYNCSKCkdtgy 111
gi 20090935   1 ----------------MTVNGAWGEIFLDH------VIAAAVLd------------R-------ILHHCTTINIK----- 34
gi 2497395    1 ----mSICDPALRNALRTLKLSGMLDTLDA------RLAQTRN--------------GDLGHLEFLQALREDEIA----- 51
gi 16262872   1 ------MLAHPTLDKLNAMGLAGMAKAFGE------LVANGEA--------------EHLSHAEWLGLLLEREWS----- 49
gi 16263033   1 ------MLAHPTLDKLNAMGLAGMAKAFSE------LVANGES--------------EHLSHAEWLGLLLEREWS----- 49
gi 15966880   4 VHN--TIDEARLGIMLNELRLPTIKTLWPQ------FAEQADR--------------EGWPAARFLSAIAEHELA----- 56
gi 16764375   1 -----MKNVIGTGSALDRLKRIIPASVQPK-------FSTADE-------------WRAWQEAEGRKRSEELDRM----- 50
gi 16765945   1 -----MKNVIGTGSALDRLKRIIPASVQPK-------FSTADE-------------WRAWQEAEGRKRSEELDRM----- 50
gi 13475046   1 ------MLTHPTHERLVALGLTGMAKAFEE------QRRSPDL--------------DALSFEERIGLLVDREAA----- 49
gi 13475199   4 NP---AVDSARLGLLLNELRLPAIKVMWPQ------FAERADK--------------EGWPAARFLAAIIEHELA----- 55
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15896822 112 igahkCSCYKKYLVQLYYDNSDLKsllneNNFENFNINYYSNrksedeprTPRKNMEKILSLSLNYIknfsdSNENLLFY 191
gi 20090935  35 -----GGSYRLKERKKQGIKTVIP-----YT------------------------------------------------- 55
gi 2497395   52 -----RRESAALTRRLRRAKFEAQ-----ATFEDFDFTANPK--------LPGAMLRDLAALR-WLD-----AGESVILH 107
gi 16262872  50 -----SRYDRKLAARLRFAKLRHQ-----ATPEDVDYRADRG--------LDRALFMKLLGGD-WIN-----AHDNLAIC 105
gi 16263033  50 -----SRYDRKLAARLRFAKLRHQ-----ATPEDVDYRAERG--------LDRALFMKLLGGD-WIN-----AHDNLAIC 105
gi 15966880  57 -----ERAHRRIERHLAEAHLPPG-----KTLESFAFDAVPM--------VSKAQVMAIAAGDSWLA-----KGASILLF 113
gi 16764375  51 -----NQKSRTEKIFGRSGIQDLH-----RSCTFANYEVSGE--------GQRKAYTMAKSYAQNFGs----GFASFVFS 108
gi 16765945  51 -----NQKSRTEKIFGRSGIQDLH-----RSCTFANYEVSGE--------GQRKAYTMAKSYAQNFGs----GFASFVFS 108
gi 13475046  50 -----ERDTKRLTTRLKFAALRQS-----ACVEDVDLRTPRG--------IDRAVFARLVAGD-WID-----RHENCLVT 105
gi 13475199  56 -----ERDRRRIERHLAEARLLPG-----KTLDTFEFEAVPM--------ISKAQVMAITAGDSWLE-----KGANLLLF 112
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15896822 192 GNSGTGKTFLSHCIAKDLLeR-GFLVIYKTSADLAQELKQLQF--EPNPTLEDLIINCDLLIIDDLGTEQISAFSKTCFF 268
gi 20090935     --------------------------------------------------------------------------------
gi 2497395  108 GPVGVGKTHVAQALVHAVA-RrGGDVRFAKTSRMLSDLAGGHAd-RSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
gi 16262872 106 GPSGVGKSWLACALGHKAC-RdDRSVLYQRVPRLFAQLALARGdgR-YARLQRTLGHVQLLILDDWGLEPLNEQARHDLL 183
gi 16263033 106 GPSGVGKSWLACALGHKAC-RdDRSVLYQRVPRLFAQLALARGdgR-YARLQRTLGHVQLLILDDWGLEPLNEQARHDLL 183
gi 15966880 114 GPPGGGKSHLAAAIGLALI-EnGWRVLFTRTTDLVQKLQVARRelQLESAIAK-LDKFDLLILDDLAYVTKDQAETSVLF 191
gi 16764375 109 GGPGTGKNHLAAAIGNHLL-AgGHSVLVVTIPDLMLRVRECYDggQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILN 187
gi 16765945 109 GGPGTGKNHLAAAIGNHLL-AgGHSVLVVTIPDLMLRVRECYDggQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILN 187
gi 13475046 106 GATGLGKSWLACALGHKAC-RdNRSVLYHRVPRLFEALALARGdgR-YGRLLKTLGRVQLLILD---------------- 167
gi 13475199 113 GPPGGGKSHLASAIGLALI-EtGWRVMFTRTTDLVQKLQVARRelGLEAAINR-LDRFHLLILDDLAYVTKDQAETSVLF 190
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15896822 269 NLINKKLLSQKKmLISSNYNLEELTRLYS------ERITSRLFGDFTLCK--FYGDDIRINRNLKNKK 328
gi 20090935     --------------------------------------------------------------------
gi 2497395  186 ELISDRAITGKPlILTSNRAPNNWYGLFPnpv-vaESLLDRLINTSHQIL--MDGPSYRPRKRPGRTT 250
gi 16262872 184 EILEDRYGRRST-IITSQLPVSAWHSVIGdpt-yaDAILDRLVHNAHRVE--LSGDSLRRNLPRKA-- 245
gi 16263033 184 EILEDRYGRKST-IITSQLPVSAWHGVIGdpt-yaDAILDRLVHNAHRIE--LSGDSLRRNLPRKA-- 245
gi 15966880 192 ELISARYERRSI-MITANQPFGEWNRVFPdpamtlAAVDRLVHHATASPRrqACRDR----------- 247
gi 16764375 188 QVIDRRLSSMRPvGVLTNLNHEGLLDSLG------ARVIDRLQMDGGMWVn-FDWESYRKNVSHLRIV 248
gi 16765945 188 QVIDRRLSSMRPvGVLTNLNHEGLLDSLG------ARVIDRLQMDGGMWVn-FDWESYRKNVSHLRIV 248
gi 13475046     --------------------------------------------------------------------
gi 13475199 191 ELISARYERRSL-LITANQPFGEWGKVFPdpsnarYPCC----------------------------- 228
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