Conserved Protein Domain Family
ElaC

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COG1234: ElaC 
Ribonuclease BN, tRNA processing enzyme [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 224155
View PSSM: COG1234
Aligned: 66 rows
Threshold Bit Score: 81.6918
Threshold Setting Gi: 15893655
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
549637   465 HVEIITLGTGSA----------------LPS-KYRNVVSTLVKVpFTDADGntin---rnimLDAGENTLGTIHRMFSQL 524 baker's yeast
11499738   1 -MRLTFLGTGVS----------------VPY-GKKAQSSILLDT-GESKIL-----------FDCGIGSYHRLEQLGVSV 50  Archaeoglobus fulgidus
19074294 298 DIPKHLYSRLTRresvecngktygggeyMED-DIDIGTIAIVYSsGNYQGLlerirrrapryFFCFQRDAAQFLSSSLDG 376 Encephalitozoon cun...
20091207   1 -MEIKFLGTGVA----------------IPQ-KGRVQSGVLVRL-EEKPLL-----------IDCGSGVLSRFPDAGVSH 50  Methanosarcina acet...
15601904  28 DLDVVVLGSGGPeiql---------frnNPSpPPRASASYLVREnGKAAFL-----------VDFGTGALQNFARSGAKI 87  Pasteurella multocida
17547214  41 GTRLILLGTGGGp---------------TPK-KNRSAPAQVIVI-NGVSYV-----------VDCGNGVARQYVSAGLTL 92  Ralstonia solanacearum
1723232  497 DIQICTLGTGSA----------------MPS-LYRNVSSTYVRIpVDKKCMedsaismknilLDCGEGTLGRLSRQYGDN 559 fission yeast
16764467  30 EINIVLLGTKGGp---------------SLL-NTARLPQATALTiGDKIWL-----------IDAGYGASLQLVKNGIPL 82  Salmonella typhimur...
15790496   1 -MQLTFLGTGSA----------------MPT-GQRMQTGLLVED-GDSRLL-----------VDCGSGVLHTLARTDVGY 50  Halobacterium sp. N...
13476858     --------------------------------------------------------------------------------     Mesorhizobium loti
549637   525 Avks---------ifqDLKMIYLSHLHADHHLGIIS----VLNEWYKYNKDDetsYIYVVTPWQYH-------------- 577 baker's yeast
11499738  51 N---------------NIDAVCITHHHLDHNGDLLN----ILKARWLLGGGV----LKIFGP------------------ 89  Archaeoglobus fulgidus
19074294 377 HffllednhfveyeslYGIQIGLNSVHKDFLLPLPAeqhmHSPLESAQSVQSc--DSLVYRKSSRCfshipaghrehipc 454 Encephalitozoon cun...
20091207  51 T---------------EVDTVLLSHLHLDHVADLVP----LIKANWLRGKTD----MRVYGP------------------ 89  Methanosarcina acet...
15601904  88 E---------------DVKGILITHFHVDHINDLPA----LVKASFFSSRHH---DLAIYGPTG---------------- 129 Pasteurella multocida
17547214  93 K---------------AIRHVFITHQHSDHNADYGA----LMLLAWGTDLAG---PVDAWGPP----------------- 133 Ralstonia solanacearum
1723232  560 Lkye----------iaSLRWIYISHMHADHHAGVIG----VLKAWTKYSDGRs--KLFITAP------------------ 605 fission yeast
16764467  83 R---------------NINTILLTHLHSDHILDYPS----LLMNAWASGLKDh--TIQVYGPPG---------------- 125 Salmonella typhimur...
15790496  51 E---------------GVDTVLLSHHHLDHVSDLLA----LLKARWLAGEET----LTVVGP------------------ 89  Halobacterium sp. N...
13476858   1 --------------------MCWNSGRWSTPPGRRG----WRRLSPCSARPA---P-AITGGAS---------------- 36  Mesorhizobium loti
549637   578 ---------KFVNEWLVLENKEILKRIKYISCEHfindsfv--------------rmqtqsvPLAEFNEILKENSNQESN 634 baker's yeast
11499738  90 ----------------------KGTKSFMESLL-----------------------------EAYPYLRGKLKFIVDE-G 117 Archaeoglobus fulgidus
19074294 455 srghknkaiLFLGTGCAIPSKYRNVSSILYESDSaaimldcgedalfqihraygeldvlkklRAIFISHSHADHVLGIAS 534 Encephalitozoon cun...
20091207  90 ----------------------KGTDDWFSQVIG-----------------------------AYEYFQDAVDVDIIELS 118 Methanosarcina acet...
15601904 130 ------------------NEFIPDTEQFITRLLG-----------------------------EKGAYSYLSGFLTGDES 162 Pasteurella multocida
17547214 134 ---------------P-----LAAMTARFLEL------------------------------YDYDIRTRIADEGRPPLA 163 Ralstonia solanacearum
1723232  606 ----------------------PQFEFWLLEYS--------------------------------RIDYLPLSNIVFISN 631 fission yeast
16764467 126 ----------------TQAMTKASWKVFDRDIT------------------------------LRMEEEGKPDPRNLVKA 159 Salmonella typhimur...
15790496  90 ----------------------AGTDALVTDLLG-----------------------------VHDYLQGRVDVTLREVD 118 Halobacterium sp. N...
13476858  37 ---------------------ARRWSSTSKSASSm---------------------------RAGLIFANWFWSAKFAEG 68  Mesorhizobium loti
549637   635 RKLELDRDSSYRDVDLIRqm--------------yEDLSIEYFQTCRAIHCDWaYsnSITFRMDENNEHNT--------- 691 baker's yeast
11499738 118 EAFDES----------------------------------VKIRAIPTVHS--------IESRGYVVED----------- 144 Archaeoglobus fulgidus
19074294 535 VLKRLDHRIKIFAPVAIRpfvehfgaksheyietnHAKGLERVFRDKIGTPTQdFpsHTINVEDYLLRSDAgfeiaicgv 614 Encephalitozoon cun...
20091207 119 PGKEFT-PEG----------------------------FDCEITCASALHS-------VPTLGYRISAEAG--------- 153 Methanosarcina acet...
15601904 163 YQIQPTSVPADKTAPMHFh----------------TEIDGFQLSAIATEHG------LLPALAWRIEKGg---------- 210 Pasteurella multocida
17547214 164 PMLHPHELTEG----------------------------GLVMQDANVKVTSAlVkhPPVSPAFAYRFDAAd-------- 207 Ralstonia solanacearum
1723232  632 SALRTDRKPSALESSRLSsl--------------fKEFDLVSFRTVPAIHCP-------YSYCMEITNSSg--------- 681 fission yeast
16764467 160 TDIGQGVIYK--D-------------------------ELVTISALKVPHS---P---FPDGEAFAYRFDTq-------- 198 Salmonella typhimur...
15790496 119 VGSVGV---A-----------------------------GFDVTAIETEHS-------MPGLAYRFGGDDG--------- 150 Halobacterium sp. N...
13476858  69 HVLDQH---------------------------------GLKVTALRVHHP-------PVTDCFALRFDQGg-------- 100 Mesorhizobium loti
549637   692 ---------------FKVSYSGDTRPNIEKFSLEigYNSDLLIHEATLENQLLED-AVKKK-----------HCTINEAI 744 baker's yeast
11499738 145 ----------------TVAISGDTRAIKEFISVE----CSLMVHELSLPFNYQ---ADy-------------HTTPENLK 188 Archaeoglobus fulgidus
19074294 615 dhcsdscgirvrdgtTVLAYSGDSRPSTLFGMMS--SNSDVMIHEATFASDQQERaAHTG------------HSTIDEAA 680 Encephalitozoon cun...
20091207 154 ----------------EIVYSGDTEPCRDIMDLA--VEADLLIHECSFPAGIKVTn----------------HTTPDTLA 199 Methanosarcina acet...
15601904 211 ---------------CRIVFSGDTSNQGNSLDRLv-QEADLFIAHNAVPETSQDNvANKl------------HMRPSEIA 262 Pasteurella multocida
17547214 208 ---------------RSIVISGDTAPSENLVRLA--HGADVLVHEVMHLPSLDKLlSTEPNaktlrehllasHTSAEDVG 270 Ralstonia solanacearum
1723232  682 ---------------WKIAYSGDTRPSEDFANIA--KDSTLLIHEATLEDSMHEIaIKKq------------HSTYSEAL 732 fission yeast
16764467 199 --------------gKRIVFSGDTSWFPPLATFA--QGADILVHEAVHVPSVAKLaNSIGNgktlaeaiashHTTIEDVG 262 Salmonella typhimur...
15790496 151 ----------------DLVFSADTEAFDGMGAFA--DGASVLVHDCSFPDEVDVSn----------------HPTPTQLG 196 Halobacterium sp. N...
13476858 101 ---------------KSVVFSADTAFFPPLADFA--KDADILVHEAMLEEGIERLvARTGNgarlkehllasHSFAEEAG 163 Mesorhizobium loti
549637   745 GVSNKMN--ARKLILTHFSQRYPklpqldnnidvmarefcfafdsmIVDYEKIGEQQRIFPLlnKAFVEEKEEEEDVD 820 baker's yeast
11499738 189 ENLRYCK--AEKLYLTHLYPMA---------------------------HAVKDEIIEYLEFd--AVVADDMMSIRL- 234 Archaeoglobus fulgidus
19074294 681 KIFEMSQ--SRTLLLTHFSQRYSkg--------------------iSSDGQWIPCVDLFRYVvgSAPYPTDEINSYYS 736 Encephalitozoon cuniculi
20091207 200 EMFGDYNgeIGSICLTHFYPEMRg-----------------------HEKEAVYRLRGYVEG--EVILAEDLMGLEL- 251 Methanosarcina acetiv...
15601904 263 RIAQQGN--VKNLLLSHLMRRTEh-----------------------VKAQTKNIIQARFDG--KIAFANDCDVYAVA 313 Pasteurella multocida
17547214 271 RIATEAK--VKTLVLSHFVPGGYp---------------------yLDDAAWLDAVRPHFKG--EIIVGRDLLEI--- 320 Ralstonia solanacearum
1723232  733 EVAKKAG--TKNVILTHFSQRYPkl-------------------pdIDISTEDLHIALAFDG--MTLKISDISLFRYF 787 fission yeast
16764467 263 KIARESH--VKKLVLSHLVPAT------------------------VADDVWQQEAMKNYPG--PVIVGHDNMTISVP 312 Salmonella typhimuriu...
15790496 197 ASLAGVD--VDDLYLTHLYPHTNg----------------------EHDAMTASIHEAGFDG--EVHIARDGLGVEL- 247 Halobacterium sp. NRC-1
13476858 164 RIASEAG--VKRLVLNHLIPADDp---------------------dIGEADWLAAVRKTWAG--DLTIARDGLVVELS 216 Mesorhizobium loti
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