Conserved Protein Domain Family
UgpA

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COG1175: UgpA 
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
Statistics
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PSSM-Id: 224096
View PSSM: COG1175
Aligned: 219 rows
Threshold Bit Score: 34.8911
Threshold Setting Gi: 17988827
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15643959  41 SLLVLIDFFIINprgypYRYTIPALILLFVLVLYPIYFTFKVAFTNYgtghfmsrqeaierllydpnfsyvvdstpvsyk 120
gi 17988827     --------------------------------------------------------------------------------
gi 17989098  31 DMPAIVHKRPKRwh--iAVFLLPCVLIYTAVMVLPLIETLRQAFYNV--------------------------------- 75
gi 17989289     --------------------------------------------------------------------------------
gi 19553657     --------------------------------------------------------------------------------
gi 18312555   1 -------MNRKIqn--yFVFLIPPLIFVGIFTIYPVFASFVYSFYTG--------------------------------- 38
gi 3915491    1 --------MRRNlt--pFFFLLPALTLMVPFVIYPVFKTIYLSFFLG--------------------------------- 37
gi 15963950   7 ttyvteIKRPRRwh--iLVFLLPALVVYTAVMILPLFETLRQSFYNT--------------------------------- 51
gi 15899430     --------------------------------------------------------------------------------
gi 13474000  30 IRP----KRPFRwh--iAIFLAPAVLVYTAIMILPLAGTLQLSLFRN--------------------------------- 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15643959 121 vfvvyDGLSPtDdflilfktgdtiflgerpkpvvargqevllsQFnlvpitgetislngdtfrivpwpadlseinlvvRG 200
gi 17988827     --------------------------------------------------------------------------------
gi 17989098  76 -----VDGQr---------------------------------VF---------------------------------VG 84
gi 17989289     --------------------------------------------------------------------------------
gi 19553657     --------------------------------------------------------------------------------
gi 18312555  39 -----SGFG--Ld------------------------------NY---------------------------------IK 48
gi 3915491   38 -----DKFVG-Le------------------------------NY---------------------------------KN 48
gi 15963950  52 -----VDGQl---------------------------------TF---------------------------------VG 60
gi 15899430     --------------------------------------------------------------------------------
gi 13474000  71 -----IEQHq---------------------------------VF---------------------------------VG 79
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15643959 201 EKTYKSFYSPddeilrlnapyfksriaqgylvnaeyvlpdgkklalriapdgewrfmyverlyrlaykeiydgvkmkitt 280
gi 17988827     --------------------------------------------------------------------------------
gi 17989098  85 LANFEALFGDpn-------------------------------------------------------------------- 96
gi 17989289     --------------------------------------------------------------------------------
gi 19553657     --------------------------------------------------------------------------------
gi 18312555  49 VITDTNPLRalvmp------------------------------------------------------------------ 62
gi 3915491   49 VLLSPDIVNlerf------------------------------------------------------------------- 61
gi 15963950  61 LGNFKVLFGDpr-------------------------------------------------------------------- 72
gi 15899430     --------------------------------------------------------------------------------
gi 13474000  80 LDNFRTLFGDpn-------------------------------------------------------------------- 91
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15643959 281 tvvnnltgrevveregafydvdengnetflvgfidfvgwknflrivkdpkvsGPFFRIFLWTFVWAVLSVVLSLAV-GLP 359
gi 17988827     --------------------------------------------------------------------------------
gi 17989098  97 --------------------------------------------------wsRDFWNALKNNVIFFLIHMLVQNPI-GIF 125
gi 17989289   1 --------------------------------------------------mtETSLDASRSLRVRAHSDLGAQRIRsAWI 30
gi 19553657   1 -----------------------------------------------mqatlKKYFPVFVLPTLLAFMIAFLVPFIvGFF 33
gi 18312555  63 ------------------------------------------------klddTPPWGALIHNVVWIAIHVPLVTVL-GLV 93
gi 3915491   62 -------------------------------------------------ptkSPPWGALIHNIVWIAIHLPTTIFL-GLG 91
gi 15963950  73 --------------------------------------------------waADFWNALKNNFVFFLIHMAVQNPI-GIA 101
gi 15899430   1 --------------------------------------------------miKYSVPYLVYIAVFGIIPLILTFVIvGIN 30
gi 13474000  92 --------------------------------------------------wsVNFWNALRNNVWFFIIHMLVQNPI-GVM 120
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15643959 360 FALVLNNPr---------------LKGRNLYRTLLIIP-WAIPVFISALVWRNGLLNEs---YGVINKFLLp-------L 413
gi 17988827     --------------------------------------------------------------------------------
gi 17989098 126 LAAMLSLPr--------------lR-FSAFYRTALFLP-TLLSFVIVGFIWKLILSPIw----gVAPWMMD--------L 177
gi 17989289  31 FLAPTLIVla-------------iVAGWPLLRTVYFSLtNASLTNLAGAEFVGFKNYFs---WVTLKSGRTv-------Y 87
gi 19553657  34 LSFTKFTTitnakwvgidnyvkafSQREGFISAFGFTVlVVIVSVITVNIFAFLLAWLltrkLRGTNFFRTvff--mpnL 111
gi 18312555  94 LAYVLKYy---------------vV-GSNLVKGIVFIG-MVIPPAIGGVIIRFMFDKDig-vVPIIFSALG--------I 147
gi 3915491   92 FALLLRKKe--------------vK-GSSIIKSIIFLG-MVIPMVVGGLIIRFLFEEGag-vIPAFFKLIG--------I 146
gi 15963950 102 LAAMLSVPk--------------lR-FGAFYRTAIFLP-TLLSFVIVGFIWKLILSPIw----gVAPYLLD--------T 153
gi 15899430  31 FSGAIKSSfs------------vaPPPEIIYNTFFFSLfTAVVSTLLGYILAITVDIYpkklLILLILLPFtipftasaL 98
gi 13474000 121 LAALLSSPr--------------lR-FAAFYRTAIFVP-TILSFVIVGFAWKLILSPLw----gVAPHMMD--------L 172
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15643959 414 FGLEP---------IKWFND--------PFWARVGVLLVNVWLTFPYMMTISLGALQSIPPELYEVAAIDG-AGRFRRFV 475
gi 17988827   1 ------------------------------------------------MTASPAQETMSFRQKMAMKGIDG--------- 23
gi 17989098 178 VGLKWa-------fAPWLGK--------ADTALVTVSLVSVWQFVGIPMMLIYAALLNIPEEIVEAAECDG-ITGWSQFF 241
gi 17989289  88 SGLLTd--------MAWWRAv-------WNTIRFTLLSVSLETIFGLVVALVLNANFRGRGLVRAAILIPWgDPDHRFGK 152
gi 19553657 112 IGGIVlgytwqtmiNAVLSHyattisadWKFGYAGLIMLLNWQLIGYMMIIYIAGLQNVPPELIEAAELDG-VNKWEMLR 190
gi 18312555 148 KELATt----------WINY--------PNLALYALILGSVWIWLGFAVTVFSAAIEAIPKSHIDAARVFG-ASDWHIFR 208
gi 3915491  147 EKLAIt----------WTAY--------PQTALFSVILGSIWIWTGFSMLMYSAGLASIPKDYYEAALIDG-ANKFQIFR 207
gi 15963950 154 VGLRSl-------fGPWLGK--------PDTALIAVSLISVWQYIGIPMMLIYAALLNIPDEVTEAAELDG-VTGWSQFW 217
gi 15899430  99 IWVISfygg--ygwFTYFLGinydplyfSKSALFAVSLVSAWSSVPLAFLLILASLKSIPKEIKESSQIDG-LTLSQYYF 175
gi 13474000 173 VGLKSl-------fTPWLGK--------EEYALTALSLISVWQFVGIPMMLIYAALLSIPDEVIEAAECDG-ITGMSQFW 236
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15643959 476 HITFPLLMTIIAPLLVSSFAFSFN---NFTIIYLITG--GGPpipnsttpTGYTDILISYVYKLAFEggQGq-DFGFASA 549
gi 17988827  24 -TTLLALPAVIFLLAVFVYPFLYG----LSLSFNPQE---GE--------GIWANYIRFFPIHSSIT------PLEQRSG 81
gi 17989098 242 KIKLPLILPSIGLISVMTFVANFN---AFDLIYSMQGalAGP--------DKATDILGTFLYRTFFGf-QL--QLGNPSM 307
gi 17989289 153 NVGLDAQRPVRHPEPYPAQSWHHQpqdCMDRQSGHCNd-rNP---------DCRRLENDTLYGAAHP--------GGSAN 214
gi 19553657 191 HVTIPMVMPSITICLFLTLSNSFK---LFDQNLALTN--GAP--------GGQTEMVALNIINTLFN--RMn-VEGVGQA 254
gi 18312555 209 RIVVPEVKPAVIIVVVMTALWDMK---IFDIVFAATg--GGP--------GGATNVLALVMYNYFAR--LL--DYFRAAT 271
gi 3915491  208 FVIWPLLRPITVVIVAMTLLWDLK---IFDIVYVATg--GGP--------GGASMVLALQMWDYFAR--SL--NYNYAAV 270
gi 15963950 218 KIKLPLILPAIGIVSILTFVGNFN---AFDLIYTVQGalAGP--------DKSTDILGTLLYRTFFGf-QL--QLGDRSM 283
gi 15899430 176 KVAFPYSLKGILLAFLITFVLSMG---NFDLPYVMTQ--GGP--------GFSTTTLPLIVYFMMFQydNFsgGALFASI 242
gi 13474000 237 KIKLPLILPSIGIISILTFVGNFN---AFDLIYTAQGalAGP--------NYSTDILGTFLYRAFFGf-QL--QVGDPNM 302
                       570       580
                ....*....|....*....|....*...
gi 15643959 550 ISILIFFLVGGISFVNFKLSGAFEEVSR 577
gi 17988827  82 WQFRLHSSV------------------- 90
gi 17989098 308 GATIAAVMFLIILAGVSLYLFGIQRRMR 335
gi 17989289 215 GAVRYL---------------------- 220
gi 19553657 255 KAVIFVVVVVVIAYFQLRATRSKEIEA- 281
gi 18312555 272 VAVILTALVVP---FVIIAIRRWL---- 292
gi 3915491  271 VAVLLTALTFIP--ALWLIKRRG----- 291
gi 15963950 284 GATIAAIMFLIILAGVALYLFGIQRRMR 311
gi 15899430 243 LALIASIPAIGVALLVKSKGFRFSLPAI 270
gi 13474000 303 GAAIATMMFLIILGGVCVYLFLVQTRLR 330
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