1L2T


Conserved Protein Domain Family
LolD

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COG1136: LolD 
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ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]
linked to 3D-structure
Statistics
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PSSM-Id: 224059
View PSSM: COG1136
Aligned: 227 rows
Threshold Bit Score: 149.197
Threshold Setting Gi: 16799821
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1L2T_A        1 MIK--------LKNVTKTYKMGEEI--IYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKP-TEGEVYIDNiKT 69
gi 19703475   1 MDIlgvt----eqkVESITLLPGYnkkGEKEGYEELVIKAGEIVAIVGPTGSGKSRLLADIEWGAQGdTPTKRTVLV-NG 75
gi 20090091  68 IQInaipekqhR--VSSLTVIGGKdksGNPE-NASITLKPGEVVCIVGPTGSGKSRLLADIECMAQKdTPTGRQILI-NG 143
gi 20090137  87 IEQaralqqgnGPTIESLTVLPGRnknGEKE-AFAVKLKKGEVTAIVGPTGSGKSRLLADIESLAQEdTPTGRKILV-NG 164
gi 1351591   83 VIT--------INKMWKNVHNDDSKqeISILSDVSLQIAYGEIVIILGSSGSGKTTLLNLIGGYDSI-SLGSCIVANcpL 153
gi 2492575    1 ------------MEIKEITIIGGYdknGNPEPVREVTIKRGEIVGVVGPTGSGKSNLISDIEQLAQGdTISKRRILV-NG 67
gi 2492586  111 VIS--------IDKMWKHVHGEDSKeqIAILSDVSLEIGYGEIVIILGPSGSGKTTLLNLIGGYDSI-SLGSCVVANcpL 181
gi 15897902   1 -----------MSEIVKVDVFKKFKn---FELKVNFSVNEGEKVLIQGPNGSGKTTLLYLIYGVLNP-DSGYVRVFN--- 62
gi 15642967   1 ------------MFVLKNVKYK------DILNIEELHIPARKITVITGKSGTGKTTLLKMLNKLISP-DSGEIFFKG--- 58
gi 16801973   1 MIE--------LVNVSKKIQDK------LILEKVSLSIGAGEFIAVVGESGSGKTTLLNVIGHLDSK-DSGQVIIN--EM 63
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1L2T_A       70 NDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMsgeeRRKRALECLKMA-ELEERFANHKPNQLSG 148
gi 19703475  76 ELMDAKKRFSPSYKLVAQLSQNMNFVMDLTVREFIDLHAESRLVLDRe---SVIEKIFNQANElAGEKFTIDTPITSLSG 152
gi 20090091 144 CVPEAQKRFSMNQKIVAQLSQNMNFVVDLTVKEFITMHAECRMISRKd---ETVNDIIYMANElTGEKFSADVSITQLSG 220
gi 20090137 165 RAPVDEERFSTEGRFIAQLSQNMNFVMDLSVEEFLTLHAESRMVDEVs---LIVQKIYDTANIlAGEPFSRKTPVTELSG 241
gi 1351591  154 EKCTSEQLLTYRKNNLGYVYQRYNLIELLSAYDN--IAISQNLIPk----yQRRLDIEELAEKlDIK-EILYKFPYEMSG 226
gi 2492575   68 EVPPIEMRRDPKKRRIAQLSQNMNFLADMTVEEFILMHAKSRGVYRe----NIVDEVIELANRlTGEPIKKDYNLTILSG 143
gi 2492586  182 EKCTTEQLLTYRKLNLGYVYQRYNLIELLSAYDN--IAISQNLIPk----eQRHLDIEELAAKlDIK-EILYKFPYEMSG 254
gi 15897902  63 ----KNPTVELRKSEMYMLEEYLIFLENASLKENLEF---ITSLR--------DFNINKTEELiNKFDLPLYKKSYQLSS 127
gi 15642967  59 TPLTEIDSVELRRK--VVMLPQFPVVFPGNVKENLLMgLKFSGKKIP-----HDEELRKILKFvMLEKDLN-DDPEKFSG 130
gi 16801973  64 EYQTKKEVMTLKKEVLGFIFQNYLLMENETVLENLS----ITGGE------NRKLMIEHLEEV-GMDESYLAKKVYQLSG 132
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1L2T_A      149 GQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGE------ 222
gi 19703475 153 GQSRALMISDTAILSTSPIVLIDEIENAGIDRKKALDLLVGNN--K---IVLMATHDPILALMGDRRIVIKNGGinkvie 227
gi 20090091 221 GQTRSLMIADTALLSASPIVLIDEIENAGVNRKKALELLVDKE--K---IVLVSTHDPLLALMGDRRIVIRNGAisniie 295
gi 20090137 242 GQSRALMIADTALLSPAAVVLIDEIENAGVDKVRSLELLVSNN--K---IVLISTHDPLLALSADQRLVIQYGGiskllk 316
gi 1351591  227 GQKQRVAIARAIIKEPKLLLCDEPTGALDSNSAENIINLLQTINKTYKQTILMVTHDVSLTRIANRIIKISDGKivsnql 306
gi 2492575  144 GQSRSLMVADVAVISDSPIVLIDEIENAGIKKHEALELLAGYG--K---IVLVITHDPVLALMTDRRIVMRNGGmqkiie 218
gi 2492586  255 GQKQRVAIARAIIKEPRLLLCDEPTGALDSNSAENIIALLQAINKEYKQTILMVTHDETLTRIANRIIKISDGKivsnel 334
gi 15897902 128 GQRRLFKLALAFSAEAKLLLLDEPTSNLDIENSKAVKDMIREYSG----TIIFASHDLLLKESCDKTIYLRTGK------ 197
gi 15642967 131 GEKQRLALARVLLMDPEVLLLDEPTSSLDEKTGIEIIKKVSNFAKSRGKTLVMVTHNPELRKFADVLIELKNGRvl---- 206
gi 16801973 133 GEKQRIAIVRILLKPFQLLLADEPTGNLDDKNKQKIIELFLALKKQ-GKTIVCVTHDPEISGKADRVIYIEKGEir---- 207
                       250
                ....*....|....*.
1L2T_A      223 ---------VEREEKL 229
gi 19703475 228 stpeeknilGALTELD 243
gi 20090091 296 tskqermnlEYMEFLD 311
gi 20090137 317 ttedekkylESLEKVD 332
gi 1351591  307 vrplv----------- 311
gi 2492575  219 tteeekeisRKINEVD 234
gi 2492586  335 vrpls----------- 339
gi 15897902 198 ---------IERIEIK 204
gi 15642967     ----------------
gi 16801973     ----------------
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