Conserved Protein Domain Family
Trm11

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COG1041: Trm11 
tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 223971
View PSSM: COG1041
Aligned: 17 rows
Threshold Bit Score: 199.531
Threshold Setting Gi: 18312769
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113289   2 SVYLLHLASTHAHFHLPELETLAKIENVEFWLIPKSEylnvafksdksrnqalfshaikefqdsispndattqnPFMLAV 81
gi 14601660   2 ERFYAILSGESPTLSLEELKAILDVESRLYKVEGFLDg--------------------------------------LAIF 43
gi 20089107   1 MLYAFELSGEHEELPAAEVLACLKIEGLDFQPHSRVD-------------------------------------QCLVVD 43
gi 2501585    1 -MIGYVLNGEHEEIPYGELMALLEIFNYNGSVERLKR--------------------------------------YVITE 41
gi 20094330     --------------------------------------------------------------------------------
gi 3183225    1 MEMMVLLSQEHPELPSAELRSVLMSEGIDFSVIESGS----------------------------------------GYE 40
gi 18312769     --------------------------------------------------------------------------------
gi 13542267   1 -----------------------MSDTYLLELSLERD-------------------------------------DARKVE 20
gi 16082390   1 -----------------------------MEFSLERD-------------------------------------EARLVE 14
gi 15791060     --------------------------------------------------------------------------------
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113289  82 VNSNEDARRWIRRSIFCKGIYEIYCIGDSfTRLHEKMKELNPAPWDSFKHNSSYKFTFETFGTRRTMKEQLSIISd---- 157
gi 14601660  44 HAEIDDPMLITSRAAFIKEVGLPLGLYRS-SDTCASKVVYDTLTFLEASVLDGDKEFWIDVETRGPYRHSLDLAG----- 117
gi 20089107  44 IAGREEDVEKTLAGSVTGRLAMTHHILKV-VGITENNP-DAVLKLAEAFEPEGYIIEGESFVVRAKRIKHHVDFPce--- 118
gi 2501585   42 DSPAKDIVKRSGYIDEGHRIIFRYNLEEKsVDLVDKIVNDFINSFKDFVANIDYPDIDESKSYAVRVLKLHKDEFtksid 121
gi 20094330   1 -----------------------------------------MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHd---- 35
gi 3183225   41 VIDAPRSTWKILKKRLAYAHEISEVIGYAaADDLDD--------AAEEIDWSKYVR--ESFAVRIRKLCGDVDSRt---- 106
gi 18312769   1 -----------------------------------------------------------MTLCRIELGARYPCLS----- 16
gi 13542267  21 ILSIQETYEDFKIEYIDDFIAVISGNWKR-IERAAFVN-TVGLILSKGEKPEDLKIDIPDGFFYIRYRDIDRDWP----- 93
gi 16082390  15 IASIQETYGTFLIEHLDEKTAIISGSWDP-LRRCAFVN-YVGLIVGEAEDLSAFQEGLPAGKFYIRYRDIDGDKP----- 87
gi 15791060     --------------------------------------------------------------------------------
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113289 158 ---FEYMQLQGPVS-MHNPQHVFTVLENRRNNVEGPKVYFGHWCGSG----SRDAIDTFDLKQRSYIGI-TSFDAELSLV 228
gi 14601660 118 ---LRSRIASEAGK-KGFKLSKRRAALNLRIFATEGAMMLGVTLSRL----EGRSFIERSPGRRPFFKP-GPLSPRLSRA 188
gi 20089107 119 --yLEQKIGGCIYR-KGFRANLKNPDVEFR-LILSEKAVLGTLLSSV----DRSAYEARTPQNKPFFHP-GVLMPRVARA 189
gi 2501585  122 slrIEKEIGGIIKLkTNAKVNLTKPDILVRVVILENTFFISNVLEMR----DREYFQKNRPHLRKYFHP-GCMLPKLARA 196
gi 20094330  36 --rVAVVEGLTDEEaERVVRRLARTHAVYRVGEGRVRVEIGGERRPVrllaEREKLSDRKPHKRPEFMP-DSTEPFLARV 112
gi 3183225  107 ---LERTIGAIIKEdTGLKVDLEKPWTLIRPVLINDRFILTRRLAVI----SKEHFNQARPHKRPFFYP-GSMSPKLARC 178
gi 18312769  17 ---LEEAYALAEIG-GCQEVEIRGQHAVFKCPSCEIFKRSALAKSIN--------GERIRKEKPQIARSvKTLDYITART 84
gi 13542267  94 ---VSEAALGDLLN-AKGRISFTHPNFVLR-VVHHKVFYLTMIMYER----DKKSFEIRKAPKRPFFSP-VSMHPKYARF 163
gi 16082390  88 ---MSEAAIGDMLK-ARGRVSFRDPDYVVR-VVHHGIFYVTKVVYER----DKKQFIERKAPRRPFFSP-VSMDPKYARF 157
gi 15791060   1 ------------------------------------------------------------------------MDPLLARA 8
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113289 229 TAQMAMAAPGKLIYDPFVGTGSFLYTCSFFGAHTLGS-DIDGRQMRGkngrsIKSNFRQYK-LSPFFLDTFTgDVTNCP- 305
gi 14601660 189 FVNLSRLQRGGSFADPFCGTGGFAIEACLLGASRIACgDLDWAMVRG-----GPLNLSRYC-PPGIWFYSAW-NAAKLP- 260
gi 20089107 190 LTNLSEIKTGELFLDPFCGTAGILVEAGLVGARVIGI-DAQEKLVLG-----AHMNLEAY--ELDYLLMEG--DACRIP- 258
gi 2501585  197 MVNLARVKEGDIVLDPFCGTGGFLIEAGLIGAKLIGC-DIDWRMASG-----TLINLEEYNlLDKVIKVKRL-DAKYVKe 269
gi 20094330 113 LVNLAEARRGERLLDPMCNVGGILIEAGLIGCVPVGV-EVREELVER-----TERNLRHYR-IEEYELHTG--RAEEVDe 183
gi 3183225  179 MVNLSGVKAGDRILDPFCGTGGILIEAGLMGVRVVGA-DIDWRMVEG-----TRENLQHYG-ITDFEVIRS--DARDLR- 248
gi 18312769  85 MVNLARVVRGSWVWEPFVGTGAVAYEVERVGGYVVGG-DVDLKALDL-----ARKNTSGD--------LVVA-DALYPP- 148
gi 13542267 164 LVNCAHVRENETILDPFCGTGGILIEAALMGIRVVGN-DVSLAMAVG-----ARTNLSYFH-VENFRVYNK--DVRELD- 233
gi 16082390 158 LVNTAHVRENQLLIDPFCGTGGILIEAALMGIRVIGN-DVALSMAAG-----ARTNLKHFH-VEDFHIYNM--DVSDLP- 227
gi 15791060   9 ACNLARVTPGDRVLDPMCGTGGVLIEAGLLGAHPIGT-DAQAKMAAG-----ARRNLTHY--VDDATTGRA--DATALP- 77
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113289 306 -LRKNl--LLDAIVCDPPYGVRAGAKKIAkcsqrppkessstgnhypkleqyqISDMVYDIICFASDRLVDGGRLVLWLP 382
gi 14601660 261 -LSSN---SVDSIATDPPYGRSTTTGRMG------------------------YLSLTRAFLNTAVEVLRSEGWIVYAGP 312
gi 20089107 259 -LKDS---TINAVVTDPPYGRSAAILAGS------------------------LEELYSGALEEIHRVLKPGGIAVVVSD 310
gi 2501585  270 fLNELnieKVDAIVTDPPYGISTAKKGE-----------------------------IEKILETLPEVIKDNGYFVFAYP 320
gi 20094330 184 iLDEP----VQAAAVDPPYGRSSYIEGGP------------------------VERLLLNTLDALSEVVEG-K-VSLTAP 233
gi 3183225  249 -LDEK----VDAIVTDPPYGISASTAGEK------------------------SEKLYREFLDSAHSNLAEGGMICMAAP 299
gi 18312769 149 -LAKK----FDAIVGDPPYGRLSKTEREVr-------------------------ALLREFIETALSLVKSGGFIVFASP 198
gi 13542267 234 -LEG-----VDGIATDMPYGRNS-YHTDE------------------------ITELYEVSFQKFSDMLKPGGYAAFAVS 282
gi 16082390 228 -VRD-----VDGIATDMPYGRNS-YASED------------------------LEVLYERSFRKFHEMLKPHGYASFVVS 276
gi 15791060  78 -LPSD---SIDAAVLDAPYGRQSKIATHD------------------------LADLVGGALDELARVT--AGRCVLVAD 127
                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 19113289 383 titeeygidDIPSHPYLSLIYNSIQPFTHWsrrlltfqrlprAHDSKSLNLLpKINNK 440
gi 14601660 313 t-------rMSPETLAEDAGLRVVKVIEMF------------VHGSLTRSIV-VARFG 350
gi 20089107 311 ---------KASFEYGEKAGLKVLEIYVQR------------VHRSLTRIIT-IFRKD 346
gi 2501585  321 --------------KKIELDMELEGLYKVY------------IHKGLIRHIH-VYKKI 351
gi 20094330 234 ---------VDAWEEVKESVKRVEGEVRDR------------VHGSLTRVIA-VVVP- 268
gi 3183225  300 h--------YLDLESLIDERFSIRERYSMR------------MHRSLTRVIR-VIERV 336
gi 18312769 199 ----------------IYVDFPYLKSCTMY------------LHGGLYRVIY-IVQA- 226
gi 13542267 283 ---------QQEHVEIAKKYFEVRYVVPVY------------QHRSLTRYFV-TARNK 318
gi 16082390 277 ---------DPDLAELARPFFNIVHDVPVY------------QHRSLTRHFI-TAMRK 312
gi 15791060 128 ---------RDWRAEATAAGWTVDARFQRR------------VHRSLVRHVL-VLA-- 161
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