Conserved Protein Domain Family
Ssb

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COG0629: Ssb 
Single-stranded DNA-binding protein [Replication, recombination and repair]
Statistics
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PSSM-Id: 223702
View PSSM: COG0629
Aligned: 82 rows
Threshold Bit Score: 50.9367
Threshold Setting Gi: 15838159
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15895648   4 LmLNNKLYLEGVIASKLEFSHEMYGEgfynfyLDVQRLSDAKDRLFVTVSe-rLITGMDLDVGKEVIVEG-QLRSYNKFV 81  Clostridium acetobu...
19553064   3 AnPSNNFNVIGRLAADPKIFTNPDGS------RNIQIAVYSTNNFANRNG---VYEDSIVPLTQFYSASK-EGNGIYSYL 72  Corynebacterium glu...
19554175   2 AiGDTNITVVGNIVADPELRFTPSGA------AVANFRIASTPRSFNRQTn--QWEDGEALFLTVNVWRQ-AAENVAESL 72  Corynebacterium glu...
13432209   1 MaGDTTITIVGNLTADPELRFTSSGA------AVVNFTVASTPRIYDRQSg--EWKDGEALFLRCNIWRE-AAENVAESL 71  Mycobacterium leprae
6647827    1 MaGDTTITIVGNLTADPELRFTPSGA------AVANFTVASTPRIYDRQTg--EWKDGEALFLRCNIWRE-AAENVAESL 71  Mycobacterium tuber...
6647827    1 MaGDTTITIVGNLTADPELRFTPSGA------AVANFTVASTPRIYDRQTg--EWKDGEALFLRCNIWRE-AAENVAESL 71  Mycobacterium tuber...
15842004   1 -mFETPLTVVGHIVNDLQRRKVG-DQ------EVVKFRVASNSRRRTSDG---GWEPGNSLFITVNCWGR-LVTGVGAAL 68  Mycobacterium tuber...
15609615   1 --------MVGHIVNDLQRRKVG-DQ------EVVKFRVASNSRRRTSDG---GWEPGNSLFITVNCWGR-LVTGVGAAL 61  Mycobacterium tuber...
19115295   7 SrAFSKRLFSSSTVRYRDIQRLTLTGnl--tkDVERLQSQKGNEYMRYTVasnNGKDVAPTFHSVYVFDSyNFDRLQTIL 84  fission yeast
417647     1 MfLRTQARFFHATTKKMDFSKMSIVGri--gsEFTEHTSANNNRYLKYSIasqPRRDGQTNWYNITVFNEpQINFLTEYV 78  baker's yeast
15895648  82 DGANRLILTVFTRNIQYCSE-RSKNPNQIFLDGFICKKPVYRTTPFGReisdmLLAVNRSYnksdyiptiaWGRNSRFCE 160 Clostridium acetobu...
19553064  73 KEGDQVAVNGYIHQDQFTDKsTGAKRYELNLSIDSIQPLETKSAADARrarkqVVEANKAQaaaqqapapvQQFAAQDAP 152 Corynebacterium glu...
19554175  73 SKGMRVIVTGRLKQRSYETR-EGEKRSVFEVEADEVGPS-LTFAKADVqrtprG-GNSGGNy--------gGGNQGGGLG 141 Corynebacterium glu...
13432209  72 TRGARVIVTGRLKQRSFETR-EGEKRTVVEVEVDEIGPS-LRYATAKVnkasrS-GGGGGGf--------gSGSRQAPA- 139 Mycobacterium leprae
6647827   72 TRGARVIVSGRLKQRSFETR-EGEKRTVIEVEVDEIGPS-LRYATAKVnkasrS-GGf------------gSGSRPAPA- 135 Mycobacterium tuber...
6647827   72 TRGARVIVSGRLKQRSFETR-EGEKRTVIEVEVDEIGPS-LRYATAKVnkasrS-GGf------------gSGSRPAPA- 135 Mycobacterium tuber...
15842004  69 GKGAPVIVVGHVYTSEYEDR-DGIRRSSLEMRATSVGPDLSRVIVRIEk-----pAYTGPS----------AGDLPAATG 132 Mycobacterium tuber...
15609615  62 GKGAPVIVVGHVYTSEYEDR-DGIRRSSLEMRATSVGPDLSRVIVRIEk-----pAYTGPS----------AGDLPAATG 125 Mycobacterium tuber...
19115295  85 RKGTRVYVEADAVWRSVPAGnEGS---QAKMSLRHVSADVLFYPRNKN-----GDESGEETh--------pELDADPMIN 148 fission yeast
417647    79 RKGALVYVEADAANYVFERD-DG----SKGTTLSLVQKDINLLKNGKK--------LEDAE----------GQENAASSE 135 baker's yeast
15895648 161 TlkvgdniriwgRLQSREYQkkvnekdtvkkt---------------ayevsiskmervGDEENAEEANIVNIGIENAQD 225 Clostridium acetobu...
19553064 153 QyagnpfaglsqTQAPVAAQvapqp-----------------------------qyvndPYAQPQAGFVPPAPVAPQVDI 203 Corynebacterium glu...
19554175 142 GnqgnqqggfsnQNSGGFGGnqgnqqqsnqggfggnqnqsqgnnfnqggfgggspqaapDNDPWNSAPPAGSGGFGGADD 221 Corynebacterium glu...
13432209 140 ------------QMSGGVG-----------------------------------------DDPWGSAPTSGS--FGVGDE 164 Mycobacterium leprae
6647827  136 ------------QTSSASG-----------------------------------------DDPWGSAPASGS--FGGGDD 160 Mycobacterium tuber...
6647827  136 ------------QTSSASG-----------------------------------------DDPWGSAPASGS--FGGGDD 160 Mycobacterium tuber...
15842004 133 Tg----------AAGAADAPa--------------------------------------SAADSVSDVVVDDAITGHNPL 164 Mycobacterium tuber...
15609615 126 Tg----------AAGAADAPa--------------------------------------SAADSVSDVVVDDAITGHNPL 157 Mycobacterium tuber...
19115295 149 Sf------------------------------------------------------------------------------ 150 fission yeast
417647       -------------------------------------------------------------------------------- baker's yeast
15895648 226 KKVI 229 Clostridium acetobutylicum
19553064 204 DPRF 207 Corynebacterium glutamicum ATCC 13032
19554175 222 EPPF 225 Corynebacterium glutamicum ATCC 13032
13432209 165 EPPF 168 Mycobacterium leprae
6647827  161 EPPF 164 Mycobacterium tuberculosis
6647827  161 EPPF 164 Mycobacterium tuberculosis
15842004 165 PISA 168 Mycobacterium tuberculosis CDC1551
15609615 158 PISA 161 Mycobacterium tuberculosis H37Rv
19115295     ---- fission yeast
417647       ---- baker's yeast
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