1JP3


Conserved Protein Domain Family
UppS

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COG0020: UppS 
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Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism]
linked to 3D-structure
Statistics
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PSSM-Id: 223099
Aligned: 76 rows
Threshold Bit Score: 135.108
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JP3_A     2 MLSATQPLS-------EKLPA-----HGCRHVAIIXDG------NGRWAKKQ-------GKIRAFGHKAGAKSVRRAVSF 56  Escherichia coli
11498314   1 ---------------------------------MLQAP------K--LDASG--------KVKYSLHLNFDEMLLRIYEK 31  Archaeoglobus fulgidus
14601375   1 -------------------------mGQPRAIGIIPDG------NRRWASLR-------GENLYIAYYTGYRNVKRILTY 42  Aeropyrum pernix
15894711   1 -------------------------mRLPNHIGIIPDG------NRRWAVSK-------GMSKEEGYNPGISPGLQLLRL 42  Clostridium acetobu...
19173309   1 MIEGLKVKAlicvveiIENGIn------SIHAMGILLF------ALNILKKAs-----vLVSRILCAWNGKLSSEYPRDP 63  Encephalitozoon cun...
20090682   1 --------------mgGYFLDtpkfkRLPGHIAIIPDG------NRRWALDR-------GLEKHEGYKHGIVPGLELYDI 53  Methanosarcina acet...
20093189   1 -------------------------------MDLLSFG------HPLYERFL--------AWQITRSTTKTPAHVAIILK 35  Methanosarcina acet...
19113007   1 -------------------MYddiffYLALWVIQSVYG------AWDWAKNWvfwtcsyLLNFLYHHHCSRDLIRRDTKK 55  fission yeast
15790699  20 AAIAAASANatsvcsrPALRSrtvdnTSNSQPSVITAApaatatNGTAAARPna---gaASDSVDTSANASARRRLQCTS 96  Halobacterium sp. N...
465535     7 IPGHSFVLKwtknifsRTLRAs---nCVPRHVGFIMDG------NRRFARKK-------EMDVKEGHEAGFVSMSRILEL 70  baker's yeast
1JP3_A    57 AANN--------------------GIEALTLYAFSSENW-NRPAQEVSA---LXELFVWALDSEV--KSLH--------- 101 Escherichia coli
11498314  32 LLER--------------------EIQKVPKHIVVVTNS---IGEGFLN-------LAKWCRKFG--------------- 66  Archaeoglobus fulgidus
14601375  43 IRDFy------------------pAIRSVYLYVLSRDNCsKRSRAELSI---LYRIMRRSIERDI--AEIE--------- 90  Aeropyrum pernix
15894711  43 CKQV--------------------GIKEVTYYGFTVDNT-KRPKNQRLA---FTDACIKAVDVIS--------------- 83  Clostridium acetobu...
19173309  64 RSRLg-------------------IFKNMNIAFICDGNRrYARKLGLEDs-fIKDKGLQKIYEFIefGCFYg-------- 115 Encephalitozoon cun...
20090682  54 CVKI--------------------GIGEVTFFGFTQDNT-KRPQIQRKA---FVDACIKSVKELS--------------- 94  Methanosarcina acet...
20093189  36 ETDL--------------------LEPKGMEKLLSALLIfKRYNVELVS---IYVDILKAEQPLKteLAST--------- 83  Methanosarcina acet...
19113007  56 LKKKpk-----------------hIAVIIECVEDGGIEGlIHDACELSAwcvCSNIRELTIYERKgfLKQSpe------- 111 fission yeast
15790699  97 ASDLpaphltspkprpttlctaarHGQHVGLYDYYLAARvRRHSAEAPAh-tAVVITERDLLEAGayDTLAdfyawafds 175 Halobacterium sp. N...
465535    71 CYEA--------------------GVDTATVFAFSIENF-KRSSREVES---LMTLARERIRQITerGELAc-------- 118 baker's yeast
1JP3_A   102 ---RHNVRLRIIGDTSR--FNSRLQERIRKSEALTA-----GNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQ 171 Escherichia coli
11498314  67 ---VDEITICGNTQIDEsfFDGFKLRIIRNGSVEEK------DGLKPTINILTFTGREEIINVVRKVAKMVERGELEVDE 137 Archaeoglobus fulgidus
14601375  91 ---KGGASLVIVGD------INHPNLPDNIRESLAP-----YHFDMYLKKGSLPDGRRVVAGLCYDPFWEIEH------- 149 Aeropyrum pernix
15894711  84 ---KENASLLVVGN-TE--SDMFPKELLPYTKRKSF-----GDGGIKVNFLVNYGWEWDLNKIKEGEKSSK--------K 144 Clostridium acetobu...
19173309 116 ---IKEISFFCFALSNFkrSPEEVNKLMGLVKQKIEr----PKEIGIRPKFRVYGRLDLLEEDVRKRLMDIEEESKNNTS 188 Encephalitozoon cun...
20090682  95 ---KHDAELLVVGN-TN--SDMFPKELLAYTKRTKF-----GKGKVRINFLVNYGWYWDLTYAFENSSDSK--------K 155 Methanosarcina acet...
20093189  84 ---LGTSIEEIFTCLSS--ETGYKIHGLEGEVKSSR-----QGKDFFVYVSLGFGGRGEITRAVLSILEEVKTGSVSPEE 153 Methanosarcina acet...
19113007 112 -avEKAIYSHLPFYLGGdkCTVHVTNPCSPDEKNQN-----DCVDLKVHLIAKEDGRDAIIDLTRGLADLCTKKVISSTQ 185 fission yeast
15790699 176 gvdRITVYVSVLDAAAVptLERELGNVAAPREVAVRgpdddERADAPIQVSVGHGGKHEFATAVRSVADAVAAGDLDPDA 255 Halobacterium sp. N...
465535   119 ---KYGVRIKIIGDLSL--LDKSLLEDVRVAVETTK-----NNKRATLNICFPYTGREEILHAMKETIVQHKKG----AA 184 baker's yeast
1JP3_A   172 IDEEXLNQHVCX----HELA---PVDLVIRTGGEHRISNFLLWQIAYA--ELYFTDVLWPDFDEQDFEGALN------AF 236 Escherichia coli
11498314 138 VDENLFEKFLTIk---------sPPDMIIKA--GNDIPDFLIWQGIYA--ELYFADIDWQNLRYADFLRILR------EY 198 Archaeoglobus fulgidus
14601375 150 YTPKTLPSRLLD-----------EIDLVIRTGGEKRLSSFFPLLTRYA--ELYFIDKLWPDFTREDLDRAVQ------WF 210 Aeropyrum pernix
15894711 145 VVSYINSSYISR------------VDLIIRWGGRRRLSGFLPVQSIYS--DFYVVDDYWPDFKPEHFFDALD------WY 204 Clostridium acetobu...
19173309 189 IIVNIFFAYSAEdeitRGIQfnsHVDILIRTSNTKRLSNFMIRQVAKGt-SVFFAKALWPELTTAHLFLILLk-----HR 262 Encephalitozoon cun...
20090682 156 MIENIASAEIPR------------IDLLIRWGGRRRLSGMLPVQTVYS--DIYVVDEMWPDFKPEHLFNALE------FY 215 Methanosarcina acet...
20093189 154 VDEKMLESHLLVk---------hEPDIMIRSGGQKLSDFLV-WQSVYS--ELYFTDVNWKDVRRIDLLRVIR------DF 215 Methanosarcina acet...
19113007 186 VTLELIDKELKEs----VIP---EPDLLIIFAPLLKLQGFPPWQLRLC--EIFHDPILYTTNYLTFFKALVH-------Y 249 fission yeast
15790699 256 IDEDVIESELVF-------Pa--EPDLVIKT-GAERLSDFMIWQSVYS--ELYFTDVNWRDFRKRDYLRAVL------DY 317 Halobacterium sp. N...
465535   185 IDESTLESHLYT----AGVP---PLDLLIRTSGVSRLSDFLIWQASSKgvRIELLDCLWPEFGPIRMAWILLkfsfhkSF 257 baker's yeast
1JP3_A   237 ANRERRFGGT 246 Escherichia coli
11498314 199 QRRERRYGR- 207 Archaeoglobus fulgidus
14601375 211 STRRRPMGR- 219 Aeropyrum pernix
15894711 205 SKQDITLGG- 213 Clostridium acetobutylicum
19173309 263 LENKYLLG-- 270 Encephalitozoon cuniculi
20090682 216 QDQDITLGG- 224 Methanosarcina acetivorans C2A
20093189 216 QKRQRRYGK- 224 Methanosarcina acetivorans C2A
19113007 250 SNAEMRLGH- 258 fission yeast
15790699 318 QNRQRRFGR- 326 Halobacterium sp. NRC-1
465535   258 LNKEYRLEEG 267 baker's yeast
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