Conserved Protein Domain Family
DAHL

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pfam19443: DAHL (this model, PSSM-Id:466085 is obsolete and has been replaced by 466085)
DAHL domain
The DAHL (Double All-Helical Ligand-binding) domain is a novel periplasmic sensory domain, which is found in major types of bacterial signal transduction proteins: histidine kinases and diguanylate cyclases/phosphodiesterases, and, occasionally in chemoreceptors. The majority of the DAHL domain-containing proteins were found in alpha-, beta-, gamma- and epsilonproteobacteria. It is also present in some cyanobacterial species. Secondary structure prediction suggested that DAHL consists predominantly of alpha-helical regions. The DAHL domain was identified in the Tlp10 chemoreceptor from the human pathogen Campylobacter jejuni and in the VirA sensor histidine kinase from a plant pathogen Agrobacterium tumefaciens. This domain recognizes Asp, Ile, purine, fumarate, malate, alpha-ketoglutarate, mannose, rhamnose, fucose, sialic acid, Arg, thiamine and galactose (Matilla et al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1 https://doi.org/10.1093/femsre/fuab043).
Statistics
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PSSM-Id: 466085
Aligned: 136 rows
Threshold Bit Score: 62.0712
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_075065000   33 RPFA-YRNYETNLNQLQRYDAELNEALVQIRFGIKKYYNPIDKALDGMHDTLQILkeeLVQSPNFPIKRLIAKDVAILEK 111  Candidatus Be...
KRG17888       27 VPFE-YEGYENDINRLQKYDAELDSAIVNTRFGLIRNYQPIVKALDGSYSVLEIL----KQELKENPNENIAEKLKSLED 101 
PLA74273       37 IDIQkNERISQHINALILGNSKLTELLLKSRYQLLNNYDPINQTLIYIEFHYEQLwpiFDQ-LPPVHSINYNQIITEEQR 115 
USDA:Abu_0887  41 EKIEnFNIYYSNVINLKILHNEFNNFINNKA--TFINYDNLNKKISETEILISSF---DTENFYKNYGYNFENLIKNLSH 115 
OPA71027       29 KATEnNSIWRNAIMNLRLLNKEIDAYFKNSL--VNTNYDEINTVFADFKTNLDQLk-nVDSFSVLSDIYGNDNDIAIIQN 105 
WP_012082506   28 KKMSrFNTLNSALKNLDYYNHLIRESIKNVLGENFVNHDHVIEAVKAFEKNLFLI-----CRSDLNEQIDKKKVCNHIRK 102  Nitratiruptor...
jgi:Saut_2012  34 ESMSnFSLQSNKITTLQLIDKELYNFTFTAN--KFTNYDEVVKQEKKFQQTFKSL-----SNDLEKYNTDTSALLKDISK 106 
WP_006656058   38 VSEEkNSQIADSLKKLESYDLRID-SVFKNQFN-FINYDSSVRDSNSFAKELEFL-------------KSQGIEISKIQE 102  Helicobacter ...
EJF07808       36 IAEKeNLQTLYTIDNLNRIDMDLTSLLSKRMSA--INYDQINFAEREFHKHIKKL---EKVSLDKNLNGR-NGIYLKIRE 109 
CDK99729       31 VDSErHAQVVTSFDTQSRIEANFDRDLLRVVAGLLPHYDTMLAYERQLRDGLDAL------EVGNPHGDIPTGQLALYRQ 104 
WP_075065000  112 AINDKEEISLHFKRINPVLINAIYQFSIVMAEIIEnqastqavesssLQEQYAQLFNaqfmekL-NNL-FRGILVYI--N 187  Candidatus Be...
KRG17888      102 VFNRKVNLTEKYKQMNPVLRNAIASFSSTMYSYFDqasn----vefiESCLEGIEQTql--vdNvGVL-FRDILIYT--N 172 
PLA74273      116 LLEKKTLLLERFLSHNAVLKNSRYYAEELISQTYThinq-----lqtTDNLLQIHKHlr---kL-EQL-LISPTKIQ--Q 183 
USDA:Abu_0887 116 EWQKEITYIERFKSLNSSVVGSLNYILELSQSLRTky--------lmNSIKDIIILD--------NAL-NSSTKLFVn-N 177 
OPA71027      106 IYLKKLQLLDRLNYVNSSIVSFLFEYEYMLDKNSE------------FKKFEPLFLK----------------LKYVd-F 156 
WP_012082506  103 IFAKELDAMESLLQESALIKSSALYLPTLQSDLIS------------VKANPKLLKQ--------VQE-MIEKLNYQiyL 161  Nitratiruptor...
jgi:Saut_2012 107 NFQKKVEDLEYFKAQNSALINSSHFLFDLHTTISD---------------APEISLQ------A-KNL-TNETLFYIl-R 162 
WP_006656058  103 IFNAKQNQLDRFKRANSIAFNSKTFLYVLHQEIAK------------LTENNPAYSQvl---kLtNVI-LAKLATENi-L 165  Helicobacter ...
EJF07808      110 KVEGKLELFEKFKSFNAMLINFVSYFYNTYGEIEK------------WDIDHSIQME------I-DKLlFSTLQDFIt-L 169 
CDK99729      105 HVTDKMQAAEQIKAVSAFVRREISYLPFAVTGFAA-------------HAAPDTARR------V-----QAALIALDt-E 159 
WP_075065000  188 QRNL--DRQkylmtlvqDIT-KTMQEIKANPQKFSsldVDMDRLSQGLAYATKILEIQPEISKIDESF-FEVPIV-PTIS 262  Candidatus Be...
KRG17888      173 AQNE--NRRs-------AII-KMIEKIESSPEKVP-------EVDLGIVYAKKILELQPQLTQVAQDL-FEMSIL-QSIN 233 
PLA74273      184 QTAN--ANAv-------EIQ-RHIQALNN--YPLP-------PLKSLEKHAQLIIDVTAEIDEQLNQV-IHTGNR-FGVN 242 
USDA:Abu_0887 178 EGNN--F----------EIAqININNLDSLVEKYN-----VSEIKFLTKRLKSLSSDLEKINNTKIEY-SKLEYK-NFLN 238 
OPA71027      157 SNTR--SIK--------GIE-QDIINLKNDIDINT------KYYKDILQKTQMILFSLKLLKELHQQN-VILNLS-SYLD 217 
WP_012082506  162 DEPM--DRQ--------TFF-ALAQSIETLAKRQE----QKKIVRNFLQHSMIIYMSLNQLENKQLEFeQKYNLLsKKIG 226  Nitratiruptor...
jgi:Saut_2012 163 YASS--DYIdk-----kSID-KKLNKLKIITHNEK-----SQYLYTFYRHSKVMLQTLQSLKEVSQEI-QANPLY-EQIK 227 
WP_006656058  166 ESEN---LK--------NLN-SIIKQLESFSNLNE------QNIQLFIKHYKMMLAQASLMQQNSTIY-QEQALQ-KEIA 225  Helicobacter ...
EJF07808      170 QKKS-------------EFK-SGFEKINALLEKFPnrlYIKTKTQQLFIRIKKMKELTARFQNITEEI-QKISLQ-EDVE 233 
CDK99729      160 SRGDtsQSA--------GLT-IEIERFAA---------SPDEELRSIALHMRTLSEQQDVLRQAIDTY-FAIPSQ-ATME 219 
WP_075065000  263 TLASAYKLAFDDYRKISSAFR 283  Candidatus Berkiella aquae
KRG17888      234 ELNTAYRSAFDNYQENSVKYR 254 
PLA74273      243 -LRDFYSSYIAEREKSANIYS 262 
USDA:Abu_0887 239 KIETELNNINYINLKRQKNLS 259 
OPA71027      218 NILIAYDHQYARILDLLQIFM 238 
WP_012082506  227 ELQKEF-DSYVMAQEKQNIIM 246  Nitratiruptor sp. SB155-2
jgi:Saut_2012 228 ALKLHIIHDYERNLQHQTWLV 248 
WP_006656058  226 LVNAMVKERLKKESQNRLYIA 246  Helicobacter canadensis
EJF07808      234 SYRKII---YIDILEYQEIYR 251 
CDK99729      220 AARHDYMAAFAIRQDRTATLS 240 
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