5DKA


Conserved Protein Domain Family
zf_C2HC_14

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pfam18574: zf_C2HC_14 (this model, PSSM-Id:465807 is obsolete and has been replaced by 465807)
C2HC Zing finger domain
This is a zinc finger domain together with a linker region found in RNF125, a small protein (25kD) that contains a RING domain, three zinc fingers (ZnFs) and a ubiquitin interacting motif (UIM). The C2HC ZnF plays an essential role in the interaction of RNF125 with the E2 UbcH5a, which originates from the requirement of the C2HC-ZnF for the structural stability of the RING domain. A mutation at one of the contact residues in the C2HC-ZnF, a highly conserved M112, resulted in the loss of ubiquitin ligase activity. Furthermore, mutations at the Zn2+ chelating cysteine residues, C100 and C103 of this domain resulted in a loss of activity.
Statistics
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PSSM-Id: 465807
Aligned: 18 rows
Threshold Bit Score: 50.8041
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5DKA_A        94 KSEYKNCAECDTLVCLSEMRAHIRTCQKYIDKY 126
XP_003759217  64 EATEATCSGCKKKLALSKMRNHVASCSKYQSYL 96 
XP_002747711  85 ESTETSCHGCRKNFFLSKIRAHVATCSKYQNYI 117
KFV79328      38 EMTETTCNGCNKKMYLSKMRSHAASCSKYQNYI 70 
XP_006639588  84 HSSLGACKGCHTEVRLSQMRSHTAVCPKYQEYI 116
XP_004070548  84 QSSISACKGCGVQIVLSQMRSHTAACLKYQDYI 116
Q6J0N1        78 KRSIGKCKGCKNEVLISDMRSHTGNCFKYQNYI 110 zebrafish
AAI67291      79 RMLLGGCMYCGKQVKLHYMKLHYKSCRKYQEEY 111
Q9D9M9        81 RHFPGNCRCCSQRVELYRMRQHYKTCEKYQDEF 113 house mouse
XP_015337690 201 RKFSGSCRCCAKQIKFYRMRHHYKSCKKYQDEY 233
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