Conserved Protein Domain Family
Tub_N

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pfam16322: Tub_N (this model, PSSM-Id:465092 is obsolete and has been replaced by 465092)
Tubby N-terminal
Tub_N is the N-terminal region of Tubby proteins. It carries a nuclear localization signal and is able to activate transcription.
Statistics
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PSSM-Id: 465092
Aligned: 20 rows
Threshold Bit Score: 135.32
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005989763 119 RQRALLEQKQKKKRQEPLMVQSNVDSRSRTRRMKQSEEqaplvesYLNSNSSTIYH-VQEAehddik--mvtdiqAPKST 195
XP_008522049   8 QQRRLFEKKQRRKRQEPLMVQANSDTSLRQGRLRWREE-------RLWGDSGLGNPfLQRN--------------VPRTH 66 
XP_013974476  27 QQRLLFEKRQRRKRQEPLMVLANPDASLRPRRRRRREE-------RLAGLGNPF---LQES--------------VPEAH 82 
XP_027370995  41 QQWRLFEKKQRRKRQEPLMVQANPDASVRPRRPRRREE-------RFSADSGPRNPfLQEN--------------VPEAH 99 
XP_003452073  37 KQRALLEQKQRQKRQQHLMVQPNTEIRPRRSRARRGEEqaplvesQLNVTNDVIID------------------------ 92 
XP_694581     36 KQRALLEQKQRRKRQELLMVQPNPDGRPRRSRPRRSEEqaplvetNISTASDIILD------------------------ 91 
8_pfamImport   1 --RALLEKKQRKKRLEPLMVQPNPEAKLRRSKPRGSEEhtplvepHTPHNNVILHVyIHPRsvifrcqivaqstlKPGVG 78 
XP_004938144  30 NQRALLEKKQKKKRLDPLMVQPNPEAKLHRSKPKGFEEqtplvetPTTFHSAVVLH------------------------ 85 
XP_015193926  29 RQRALLEQKQKKKRQEPLMVQANVDGRSRTRRAKQSEEqaplvesYLSSNSSTIYH-VQEAeqedvk--vvtdpqAPRSA 105
XP_027305647  36 NQRALLEKKQRKKRLDPLMVQPNPEAKPRRPRPKGCEEqtplvetPTPFHSDVMLH------------------------ 91  mallard
XP_005989763 196 KKTK-SAATSS--QTGSARkekkgkhkGIDGP-AAFQDEVQEVGSQIHILTVGQS----SLDDGd-------------GE 254
XP_008522049  67 PRSGaHSDLSTvsCSGDGS--------GERGPlVPPTEA-ESSDLELEEVSVEDVpafpPPYKEppgtrr--rgwpalQR 135
XP_013974476  83 LSSGaHCALGIvsCSGDGS--------GERDPlASPTEA------ELEEVPVEDVptfpPPYKEppgtrr--rgwpahQQ 146
XP_027370995 100 LCPGsHGILGTvsCGGDGS--------GERDPlLPPTEA-GSSDLELEEVSVEDVpaspPPCEEppgtllqrkgwparQR 170
XP_003452073  93 ---------------------------GIDGPaAFLSSEPPDIGMKIQILSVSQSqsqsQPESQsqsqs----qspaaEE 141
XP_694581     92 ---------------------------GIDGPaALLGSEAPDLGSKIQVLSVSQTpqqpSPPVT--------------EE 130
8_pfamImport  79 REHPfFQLLGL--QGSSKMmrgrgmspGIDGPaAFLKPDAQDAETKLHVLSVGSSateeDTEAGr-------------DS 143
XP_004938144  86 ---------------------------GIDRPvSFLKSEVQDLGNKLQTFSVGSSitaeNADEE---------------N 123
XP_015193926 106 KKAK-SAPSAS--QTGSAKkekkgrhkGIDGP-AAFQDEALDLGNQIQILTVGQS----SICEGe-------------GD 164
XP_027305647  92 ---------------------------GIDGPaAFLKSEVQDLGTKLQTLSVGSSitedNADEE---------------K 129 mallard
XP_005989763 255 TVASG-QQQ---GKQDLRVTMQKK--GISSSMNFD---------------EEEDEEDEDSSSSSQLNSN---TRPGSATS 310
XP_008522049 136 SGASAeEES---ESRDVGDEYETLraEPNPRMDGYggrgdla-sskgedvEEKEEESESTARNSPGVADeemSEAPESKG 211
XP_013974476 147 PGASAeEES---ESQDVGDEYESPspGPDPGMDGDdlgrgdlasnkgedlKEKKQKSESPVRKSPAAAEaavSEAPEGEV 223
XP_027370995 171 SGASAeDKS---ELQNVGIEYEVPsaRSSPGMDGDsglgdla-snkgedlEEKKEEPEFTMRKSPGTAD---EVVSEGAR 243
XP_003452073 142 PERDGdTETllePKTDIHELLQKQ--GLCESMNFDeas----------ehEEDLEEERTRSRSSHTDSN----RPASATS 205
XP_694581    131 PETDAdTDTllePKTDIHTLLQRR--GLSGSMNYDeas----------edEDEDDEYEAEERSRSLSPNtesTRPASASS 198
8_pfamImport 144 TAASGsHHP---RPQRYRLSKKGL--GISGSLNFD---------------EETDGEEEEGKKLSH-SPRseaERPSSASS 202
XP_004938144 124 NGHVLtETL---RNAHLQEILQKR--GISGSLNFDe--------------EDTEEEEEVSKRPASQSPHpesERPSSATI 184
XP_015193926 165 PVTST-QQQ---GKQDLRVTMQKK--GISSSMNFD---------------EEEDEEDEDSSSSSQLNSN---TRPGSATS 220
XP_027305647 130 DGQSItETS---VKPDLQEILEKR--GISGSLNFDe--------------EDTEEEEEASKRPASHSPHpesERPSSATS 190 mallard
XP_005989763 311 KKS 313
XP_008522049 212 DAG 214
XP_013974476 224 GAG 226
XP_027370995 244 GAG 246
XP_003452073 206 GKD 208
XP_694581    199 TKS 201
8_pfamImport 203 QKS 205
XP_004938144 185 KKS 187
XP_015193926 221 KKS 223
XP_027305647 191 EKS 193 mallard
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