6GOP,6AVO


Conserved Protein Domain Family
Pr_beta_C

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pfam12465: Pr_beta_C (this model, PSSM-Id:463597 is obsolete and has been replaced by 463597)
Proteasome beta subunits C terminal
This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam00227. There is a conserved GTT sequence motif. There is a single completely conserved residue Y that may be functionally important. This family includes the C terminal of the beta-type subunits of the proteasome, a multimeric complex that degrades proteins into peptides as part of the MHC class I-mediated Ag-presenting pathway.
Statistics
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PSSM-Id: 463597
Aligned: 98 rows
Threshold Bit Score: 39.69
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6GOP_V                193 PNVREEKQKSYKFPRGTTAVLKESIVNICDIQEEQV 228 Saccharomyces cerevisiae S288C
CAZ84023              221 PNERVPKEMSYKFARGTTGYIKEMVVEKKDLKKYVT 256
EKD05517              213 PNERVHKNRDYKFRRGTTAWLKENV-RDLIASETVH 247
XP_007400410          229 PNERVEKERHYVFRRGTTAIKSETV-RSLLVEETVT 263
XP_014569797          249 PNERVQKEMSYKPKLGTTVWKKEMV-KSLIVKTEVI 283
KDE05115              221 PNQKVDKERSYKWRRGTTAYTKEEV-KYHLVKEEVT 255
EAU81477              229 PNVRVQKERDYKFRRGTTAWKKEDI-RKLVIDEQVT 263
XP_007333729          226 PNQRVQKERDYKFRRGTTAWTKEDV-RKFVVEETVT 260
EGG10123              228 PNERVPKELSYKMRRGATAWIKHDV-RKLIVDESIT 262
WGS:AAWC:PGTG_07060.3 234 PNERVAKELNYTMRRGTTAWIKQDI-KKLIVSESVT 268
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