2DO7,1U6G,1LDJ,3O6B,6V9I


Conserved Protein Domain Family
Cullin_Nedd8

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pfam10557: Cullin_Nedd8 (this model, PSSM-Id:463146 is obsolete and has been replaced by 463146)
Cullin protein neddylation domain
This is the neddylation site of cullin proteins which are a family of structurally related proteins containing an evolutionarily conserved cullin domain. With the exception of APC2, each member of the cullin family is modified by Nedd8 and several cullins function in Ubiquitin-dependent proteolysis, a process in which the 26S proteasome recognizes and subsequently degrades a target protein tagged with K48-linked poly-ubiquitin chains. Cullins are molecular scaffolds responsible for assembling the ROC1/Rbx1 RING-based E3 ubiquitin ligases, of which several play a direct role in tumorigenesis. Nedd8/Rub1 is a small ubiquitin-like protein, which was originally found to be conjugated to Cdc53, a cullin component of the SCF (Skp1-Cdc53/CUL1-F-box protein) E3 Ub ligase complex in Saccharomyces cerevisiae, and Nedd8 modification has now emerged as a regulatory pathway of fundamental importance for cell cycle control and for embryogenesis in metazoans. The only identified Nedd8 substrates are cullins. Neddylation results in covalent conjugation of a Nedd8 moiety onto a conserved cullin lysine residue.
Statistics
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PSSM-Id: 463146
Aligned: 334 rows
Threshold Bit Score: 46.6753
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DO7_A         27 DRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQL-----KFPV--KPADLKKRIESLIDRDYMERDKEN 87   human
XP_002549970  767 NRDEEFKSCIVKLMKQEKQLDIHDLLNRSITFLq---kKQSV--DFSRLKVIIEKLIETEYLKRDDND 829 
XP_001007602 1020 HRKVIINSYIVQIMKDKETLHKDELIKLVQQKLkdnkqIFII--TDSFVKDQIQSCIDQDYLKNSQEQ 1085
XP_001467468 1128 KRRNMIKTSIMQIMKHVQRIKHDELYNTVREKNa---kAFDV--TVRNFKQEIEGLIGQDFMARSCKD 1190
Q583G1        883 TRIGAIQAAVMHRLKTVQHGSYKDLFQFTQESLr---hHFQL--SDVEFKEVLRRLIDKEYIVRDQED 945  Trypanosoma brucei
Q4CRP5        948 SRIASIQAVIIKHMKSVRTCLYDELFCWTRQQn----pQFQL--QNSDFKLALEMLIEKEFVQRDPSQ 1009 Trypanosoma cruzi
XP_002490748  719 ETTNRINAFIMRTMKQQRDCSHSKLLADILSFLk---eYNISipKASIVKECIEELIKQGYLKRDASG 783 
XP_001321633  615 DHLNGVRAAAIKIMKNENKLSRDSLKKSILQITs---kLFET--YDDEMNRAIKSLIFDQYLSVDKND 677 
EKM49220      408 EHKYALRAAIIRVMKAKRKLSREQLGAAVAEAGi---sKFFPppSVALMDECIEGLVRDDYLGRAADA 472 
Q38AL5        639 THAESIQAVLMQIVKRNKTLSHGEMFTQVAEALkg--sRITP--VMAHIKQNLEILINKGLISRGSRP 702  Trypanosoma brucei
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