1XWI


Conserved Protein Domain Family
Vps4_C

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pfam09336: Vps4_C (this model, PSSM-Id:462762 is obsolete and has been replaced by 462762)
Vps4 C terminal oligomerization domain
This domain is found at the C terminal of ATPase proteins involved in vacuolar sorting. It forms an alpha helix structure and is required for oligomerization.
Statistics
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PSSM-Id: 462762
Aligned: 122 rows
Threshold Bit Score: 62.1292
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1XWI_A       259 LTPCSPGDPGAIEMTWMD--VPGDKLLEP-VVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFG 319 
Q240K0       425 YVACAPSDPQGESKVLMD--IQ-GSMLKLqDVSIDHFELALQSCKPSVSEKDIERQIEFTKEFG 485  Tetrahymena thermophila SB210
EFC38827     167 IVPCSRNEKNSKKMNMLD--IKQPEKLKIaKVTAKDIYDSIKSVKPSTNPSEILSFIEFTQNYG 228 
ERT00887     914 WVPCEAGSAGARQMTWKN--VPQGKARAP-PLTVDDFFAAVAKVKPSVGANEITRCAEWTAQFG 974 
XP_003652903 262 YTPCDKTDPGAIAMTWRK--VPPNRLKEP-PLTAADLFVVMQHVKPSVAPDELDKYVAWTEQFG 322 
EAY23276     380 veaCAPNAPGARKWSLRDpdFPADKIESP-PVKFEDFKEAICKIHPTVSPAELVKYQTWTNEFG 442 
EAY20193     366 fFPCPENTPGCVKMNLHDpnFPIDKVPVP-PITFEDFKDAMHKAKSSVSPKDIQQFEEWTALFG 428 
EDO31428     221 apPCSEGEPGCVTCLLKD--LP-PQKVTPrPVVLEDFIRSLSHNGSTITDEDLDKFTVFTKSYG 281 
EGD83623     362 WRPCDEEEPGALRGNVQD--IPAEDAVAR-SVRSGDVAKAIARNPRTVSSEELARFLAYnqh-- 420 
EKC22348     211 FVPCKEDEDADLKASIVE--IP-ADKVRPrEVTLNDFLSALKTHRKTVTQEEIQKFENFTKSMG 271 
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