6MZL,1TBA


Conserved Protein Domain Family
TBP-binding

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pfam09247: TBP-binding (this model, PSSM-Id:462723 is obsolete and has been replaced by 462723)
TATA box-binding protein binding
Members of this family adopt a structure consisting of three alpha helices and a beta-hairpin. They bind to TATA box-binding protein (TBP), inhibiting TBP interaction with the TATA element, thereby resulting in shutting down of gene transcription.
Statistics
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PSSM-Id: 462723
Aligned: 20 rows
Threshold Bit Score: 60.3494
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6MZL_A         28 EDSAGG----GPFSLAGFLFGNINGAGQLEGESV----LDDECKKHLAGLGALGLGSLITELTANEE 86  
XP_003241670    5 SSSEAQq---GDFDLTSFMFGNIDESGQLEDDDL----LDKDTKKYLASLSKLGFSSMVSEVIDSSE 64  
1_pfamImport    2 SDDEET----GKFELTSFLFGNIDERGELEDD-I----LDNESKRHLSSLARLGFGSFIKEIVNEE- 58  
XP_011146890    4 SEEENEkdlaSGLNITGFLFGNIDDNGQLEDD-I----LDPEAKQQLASLSRLGLSSFISEMIQNES 65  
ETN64130        7 NDSDKNe---GGLNLAGFLFGNVDEHGNLDGD-F----LDEEAKQQLSSLSRMGLSSFLSAMLHDDD 65  
Q7QK07          7 SDNENE----GGLNLAGFLFGNVDENGHLDGD-F----LDEEAKQQLSSLSRMGLSSFLADVLQDDD 64   Anopheles gambiae str. PEST
XP_028027172    6 EQGDHSr---SGLDLTGFLFGNIDERGQLEDDGL----LDGESKRMLSSLSRLGLGSMLSEVLEVEE 65  
OWR41530        6 DPNENGr---SGMDLTGFLFGNIDESGQLEDNGI----LDDESKRMLSSLNRLGLGSIISEVLDEND 65  
XP_002070787    3 SDDD------LGMDLTGILFGNIDSDGRLLDDDDgngkFDAEFRENLGSLSKLGLNSMLNEVITDHE 63  
EDW34083       13 SIGNGGg--dFGMDLTGILFGNIDSDGRLLADDErgqgFDAELRENLGSLAKMGLNSLLHEVIDTKD 77  
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