6WJV


Conserved Protein Domain Family
DUF1744

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pfam08490: DUF1744 (this model, PSSM-Id:462493 is obsolete and has been replaced by 462493)
Domain of unknown function (DUF1744)
This domain is found at the C-terminal of the epsilon catalytic subunit of DNA polymerase. It is found C terminal to pfam03104 and pfam00136.
Statistics
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PSSM-Id: 462493
Aligned: 97 rows
Threshold Bit Score: 291.372
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6WJV_A       1528 LGQIYKQMFEKkk---gKIETYSYLVDIKEDINFEFVYFTDISKLYRRLSQETTKLKEERGLQFLLLLQSPFi-TKLLGT 1603
Q9VCN1       1529 MRQLYTAERLAllknltAEE---QDKIPVEDYTFEVLIEVDVKQIYRHIQRALTTYKQEHQGPTILCLQTALsaRKLSLA 1605 fruit fly
EDS31604     1523 LKNLYTSERLAllkgesENF--TEDSLPPADMTFESFMEIDQKQVYQKLSRLLSAYKDEKRGPTILCVQTALglQKLNQL 1600
Q7Q7P3       1525 VKNLYTSERIAllttsdEHG---EDMLPPSDMTFEVFMEIDAKQVYQRVTRALSAYRDEKRGPTLLCLQTALglHKLNQH 1601 Anopheles gam...
XP_002429092 1513 LKNVYNKERNNrisngsNEL-----ELPPDDFTFEVHAETESKNIYKSIHNVLNSYKKEGQGATVILLQSYLdfNILSAS 1587
XP_001945457 1505 LNTLYTKERNTkisrghNES-----NIPPSDITFEVRVETEERQVYRQIQRTLQSYRDEKRGPTMLVIQSPIdiQVMLSN 1579
4_pfamImport    1 LNNMYNSERKLklskteAKE---EHLLPPAGVSFDVKIETDPKQAYRHIVAALQVYRDEKKGPTLIAVQSNRdiQETTML 77  
XP_011154483 1525 LNTLYTQERNAmlaqedESK----ISKLPKTMQFVVQGETNFQQVCRTLQAALTAYKNEGHGATIIINQTAMdkVMLTAE 1600
EFA06672     1501 LNKLYQAERMAk-----KEKGTEDDSLPPASVTFEIRVESDLGQVYKTLQKALQFYKDEKKGPTLLAVQSALepATLRSR 1575
XP_009858713 1497 LQALFKNKRTKllsqddVNE----DVLPHPDYQFEARVDVDVKQLYRNMQRYLSTYKDERRGPTMIIYQSTSsvKKIKSK 1572 vase tunicate
6WJV_A       1604 IRLLNQMPIVKLSLN---EVLLPQLNWQPTLLKKLVNHVLSSGSWISHLIKLSQYSNIPICNLRLDSMDYIIDVLYARKL 1680
Q9VCN1       1606 MPILLEFPQAEIHISd-dASLLSGLDWQRQGSRAVIRHFLNLNNVLDLMLDQCRYFHVPIGNMPPDTVLFGADLFFARLL 1684 fruit fly
EDS31604     1601 IPVCLEFPETQIHIAd-dASLLSGLEWQRHGARSMVRHFLNLNHVVEMMLDQCRYFQLPIGNMPADTVLFGADLFYARHL 1679
Q7Q7P3       1602 LPICLEFPEVSIHIAd-dAALLSGLDWQRHGARSMIRHFLNLGRVLQMMLEQCLYFQLPLGNMPPDTVLFGADLFFARLL 1680 Anopheles gam...
XP_002429092 1588 IPSLLEFPVITFHTKd-pDNLYATLEWQKLGTRIMIHHFLNSITTLNSVLYQSKFFHAPPGNIPADATLFGTDLFYARHL 1666
XP_001945457 1580 IPIMNEFPVVTLHVQdstASMYAQMEWQRLGCSLIVNHYLNSPENINIMLEQCRYLQIPLGNLPADVTLFASDIFFARHL 1659
4_pfamImport   78 LPIINEWPFMSIYVQe-sEPIYSTLDWQRLGSKLMVKHYLNSEKAIALQAELCRYFHVPIGNIPQDTTMFGADLFFARHL 156 
XP_011154483 1601 MPLLNDFPIVSTHVQd-vENLYNMLEWQKIGAKMMVRHYLKSQQIIELMAEQCRFFHAPIGNIPADPTLFGADLFYARHL 1679
EFA06672     1576 IPLFSDFPQVQIHITd-eEELYNVMDWQKIGGRALVRHYLNSEKVLDLMIEQSRYFHLPVGNMPPDPALFGSDLFYARHL 1654
XP_009858713 1573 LPILHDFPIIHIHNNn-aDQFNDELTWQKDASNIMVDHFLESKLIFPRLLSFSKYFHIPVANFPSPLGTFVTDLLCARHL 1651 vase tunicate
6WJV_A       1681 KKENIVLWWNEkAPLPDHGGIQNDFD---LNTswimndSEFPKINNSGVYDNVVLDVGVDNLTVNTILTSALINDAEGSD 1757
Q9VCN1       1685 QRHNFVLWWSA-STRPDLGGREADDSrllAEFe----eSISVVQNKAGFYPDVCVELALDSLAVSALLQSTRIQEMEGAS 1759 fruit fly
EDS31604     1680 LKSNFILWWSP-SSRPDLGGREADDSrllAEFe----dNISVVQNRSGFYGTVCVELSIESLAVSALLQAGKVQEMEGAS 1754
Q7Q7P3       1681 HRHNFVLWFSG-GARPDLGGREADDSrllAEFe----dNISVVQNRSGFYRSVCVELTVESLAVSALLQASKVQELEGTS 1755 Anopheles gam...
XP_002429092 1667 LKNNFVLWCSD-NELPDFGGTEADDSrllGEFd----eLSTTVINKEGCYTSISVEMDIDALAVNTLLQLNRMNEAEGIS 1741
XP_001945457 1660 MKHNFVLWISE-TDKPDLGGRESDDNrmlMDSe----eSSSMLVNNEGCYTSYCIELEIDALPVTTLLQSHHIHDFEGTS 1734
4_pfamImport  157 LKNNFVLWCSE-SDRPDLGGREADDNrllSDFe----eNTNVISNNLGCYSTICVELDIDSLAVNTLLQSHHVHDIEGTS 231 
XP_011154483 1680 HRNNFVLWCSP-TEKPDLGGSENDDNrllTDFe----eSSSCAANNPGTYSSVCVQLDVESLAVNALLQYHHIHDIDGTS 1754
EFA06672     1655 TKHNHVLWCSP-TDKPDLGGVEENDS----RLlaenqeGSSEVCNVPGWYSSVCIELDVDCLAINTLLQSHHVTDIEGTS 1729
XP_009858713 1652 RKHNHVLWCST-GDQPDVGGMETEDKr--iGMnq--rrNASIEINNSGFYQTVCIQLDISSLAVNTVLQSHNINDTEGAS 1726 vase tunicate
6WJV_A       1758 L---------VNNNMGIDDKDAVINSPSEFVHDAFSNDALNVLRGMLKEWWDEAL-KENSTADLLVNSLASWVQNPNAKL 1827
Q9VCN1       1760 SaitfdvmpqVSLEEMIGTV--PAATLPSYDETALCSAAFRVMRSMVNGWLREVSiNRNIFSDFQIVHFYRWVRSSNALL 1837 fruit fly
EDS31604     1755 SaitfdvipqASLDDMISNQ-GGVQTLPSYDETALCSQAFRVMRSMVNGWLREVSiNRNIFSDFQIIHFYRWVRSSKALL 1833
Q7Q7P3       1756 SaitfdvmpqASLEEMITSG-PNGQQLSNYDETALCSQAFRVMRMMVNTWLREVSiNRNVFSDFQIIHFYRWVRSSRALL 1834 Anopheles gam...
XP_002429092 1742 SslafdsapqVVMEDLLSGS---NNHCVTYDESAVCSSAFRILRILAGILIREVSlFKNILADYQISHFYRWLRSSNALL 1818
XP_001945457 1735 AgvafdqipqASLEEIMDGG---TFVTPTYDEIALCSAAFRVLRSMVNVWFRDVVlHKNPFADFQMVHFYRWLRSPNALL 1811
4_pfamImport  232 SsvgfdtmpqLSIGEQVSGQ---VPVLPIYDEGALCSGAFKVMRFMVNAWLRDVTiHRNVFADFQIVHFYRWLRSPTALL 308 
XP_011154483 1755 TfvafhnqqrPSVQDIVTGD--AATIIPSYDEITLCNPAFKTLRSMVNAWLLEVSvYKNVFADYQLIHFYRWLRSSNALL 1832
EFA06672     1730 Sata---fdgVGATSLDDLV---GDNPTVYDETARCAEAFKILRTMASIWMRDISlYQNIFADFQVVHFYRWLRAPKALL 1803
XP_009858713 1727 Sgvc-------fegDLVSSSNSAMVCLANYDETVLCSSTFRILKSMILGWLRDVSvHKNHLADNQLQNFHQWVTDKSSLF 1799 vase tunicate
6WJV_A       1828 FDGLLRYHVHNLTKKALLQLVNEFSALGSTIVYADRNQILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWD 1907
Q9VCN1       1838 YDPALRRSLNNLMRKMFLRIIAEFKRLGATIIYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWN 1917 fruit fly
EDS31604     1834 YDPALRRALNTLMRKLFLQIIAEFQRLKAEIIYADFNRIVINTGKKAVMDAIAYTDYVVQSIRNKELFHSVSLSYQQSWE 1913
Q7Q7P3       1835 YDPALRRALNTIMRKLFLQIVAEFRRMKATIIYADFNRIVIDTGKRTVGDAISYTDYIVQNIRNRELFHSVSLSFQQAWE 1914 Anopheles gam...
XP_002429092 1819 YDPSMRKIIHNLMKKFLIQLLSEFKRLGAIVIFANFNKIIINTKKNNFSDAIGYIDFIEKNIKQKELFHGVQLKASQYWH 1898
XP_001945457 1812 YDPALRKTLYSLMRKLFMQLIAEFKRLGSTIIFANFNKIVICTKKKSLEDAIFYVRYVVQNITNKELFHSLQISLGPCWE 1891
4_pfamImport  309 YDPALRRTLHNLMKKLFMQLVAEFKRLGSVIVYANFNKIIVCTKKRNIEDAIGYIEFVVASIKNKELFHSIQMSYSQCWK 388 
XP_011154483 1833 YDPALRRTLHTYMKKLYIQLIAEFKTLGCIVVFANFNKIIMCTRKRSVTDALSYMEFVVQTIRNKELFHSIEITFDQCWE 1912
EFA06672     1804 YDPALLRTLQNLMKKLFLQLVAEFKRLGCTIIYANFNKIVICSKKKSVEDAMENVEFVVTSIRNKELFHSLDISFRQCWE 1883
XP_009858713 1800 YDPSIHKSLQMMMKKLILRLLSELKRLGSTIIFANFSSIVLCTKKQNVEDTLSYMEYISNSIVSKDIFHSMVLTVRKCWK 1879 vase tunicate
6WJV_A       1908 LLIWMDKFNFSGL 1920
Q9VCN1       1918 FMLWMDQANFSGI 1930 fruit fly
EDS31604     1914 FLLWIDSSNFGGI 1926
Q7Q7P3       1915 FLLWNDPTNYGGV 1927 Anopheles gambiae str. PEST
XP_002429092 1899 LLLWLDNSNFCGV 1911
XP_001945457 1892 YLMWLDLWNYSGV 1904
4_pfamImport  389 YLMWLDPANHGGV 401 
XP_011154483 1913 YLVWLDLHNHAGI 1925
EFA06672     1884 TLVWLDPANYAGV 1896
XP_009858713 1880 HLLWMDNANYGGM 1892 vase tunicate
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