6DCB


Conserved Protein Domain Family
Bin3

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pfam06859: Bin3 (this model, PSSM-Id:462022 is obsolete and has been replaced by 462022)
Bicoid-interacting protein 3 (Bin3)
This family represents a conserved region of approximately 120 residues within eukaryotic Bicoid-interacting protein 3 (Bin3). Bin3, which shows similarity to a number of protein methyltransferases that modify RNA-binding proteins, interacts with Bicoid, which itself directs pattern formation in the early Drosophila embryo. The interaction might allow Bicoid to switch between its dual roles in transcription and translation. Note that family members contain a conserved HLN motif.
Statistics
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PSSM-Id: 462022
Aligned: 71 rows
Threshold Bit Score: 95.6852
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6DCB_A       195 YDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYG---KRKTL-----TETIYKN----YYR--- 259
EFA03973     126 FDAVFCFSITMWIHLNYGDDGLIRFLNEICDLGDF---VIIEPQPWKCYRsavKRLKL-----SDATFPL----FKE--- 190
XP_004927023 132 FDITFCFSVSMWIHLNNGDNGLREFLEHIKTISKS---IIIEPQPWKCYR---QAQKR------IKKTGNtfqlYDT--- 196
EDS35689     137 FDMVFCFSVLMYPHLNHGDEGLRSVLDYICSKTKV---LVLELQSWDKYR---DNVRR-----LKRDCGEqfplYEK--- 202
XP_005986220 160 FDICFCMSVTMWIHLNHGDCGLLGFLSSIAGLTQF---LLIEPQPWKCYR---SAARR-----LRKLGRNdfdhFKK--- 225
XP_002404435 131 FDITFCFSVTMWIHLNHGDEGLKSFLVSVCANTRY---LLLEAQLWKCYR---SASRR-----MRRASCDefqhLDT--- 196
XP_013020967 146 FHTVLALSVTKWIHLNGLDEGLLSFFKKMHAVLEPDGVLIIEPQSWDSYLkaaKKFLF----------------FEKslh 209
Q9Y7L2       147 FKIILALSVSKWVHLNNHDEGIIKFFGKISSLLETNGVLILEPQGWDSYLkaaKKISV----------------FNQtpe 210 Schizosaccharom...
Q7RLF1       279 YDVIICFSVLKWIHLNYGDNKLILFFDLVYKLLKSGGYFILEYHREIKYKl-kKNERIfflkkKKALKMN----YTHfdn 353 Plasmodium yoel...
XP_317552    156 FDVICCFSVLMYVHLNGGDAGLRRVLDYLCSKGKF---LIIELQSWQKYR---DQVRR-----LKRDAGEtypqYTG--- 221 Anopheles gambi...
6DCB_A       260 -IQLKPE------QFSSYLTSpDVGFSSYELVA-TPHN----TSkgF-QRPVYLFHK 303
EFA03973     191 -LQITHD-------VENKIEQ--HILTSCKAVKlYESE-----RseW-GRKLQIF-K 230
XP_004927023 197 -LKIRSQvd---iFIESILKE-HTHIKVYESQNsS-----------W-NRKIQSYKL 236
EDS35689     203 -LEWRGNqgkleqNIYEYVEK--LGFERKSEEFdKNE---------Y-KRNIVIYSS 246
XP_005986220 226 -LEIKGDvt---eKIREYLLA-DCSMELVTCFGsTN----------W-DRSLLLFKR 266
XP_002404435 197 -LRMNINve---eNIHSFLLG-RCCMELVQCFGqTQ----------W-DRKVTLYRK 237
XP_013020967 210 kIQIRPE------NFPEILEQ--HGFDLQTVVSsENARpkniEQrgFsKRDIFIFRK 258
Q9Y7L2       211 nLKIQPD------AFEHLLNQ--AGLVLEYSIEpQVNNse-yKN--FaKRTMYIYKK 256 Schizosaccharomyces pombe 972h-
Q7RLF1       354 iAQGGYN------NIAKFILInKTDFKSDSKRKrDTGM--------F-NRTICIYKK 395 Plasmodium yoelii yoelii
XP_317552    222 -LQWRGNggalegCITSYVQS--NGMELVAESAeKTE---------F-DRQLIFFKN 265 Anopheles gambiae str. PEST
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