5ZWO


Conserved Protein Domain Family
PRP1_N
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pfam06424: PRP1_N (this model, PSSM-Id:461908 is obsolete and has been replaced by 461908)
PRP1 splicing factor, N-terminal
This domain is specific to the N-terminal part of the prp1 splicing factor, which is involved in mRNA splicing (and possibly also poly(A)+ RNA nuclear export and cell cycle progression). This domain is specific to the N terminus of the RNA splicing factor encoded by prp1. It is involved in mRNA splicing and possibly also poly(A)and RNA nuclear export and cell cycle progression.
Links
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Statistics
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PSSM-Id: 461908
Aligned: 105 rows
Threshold Bit Score: 86.0397
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5ZWO_N         11 PPAGYVPGIGRGATGFS---Tkekqvv-------------------------snddkgRRipkryreNLNNhlQSqPKDD 62   Saccharomyces...
XP_002180133   79 APQNYVPGAGRGAGSMGaagTggpata--------------------------tvgsyDAfggyqerPVNE--VPgQYDE 130 
EFC49970        5 PPPGYVAGIGRGATGFT---TrsdigparlpsrftqpqgsssnstteeeneqetnqtfDEwsg-yggNILGrvTG-VEDE 79  
XP_011276801   11 APIGYIAGIGRGATGFT---Tradvgagrlpp----------------qqrdigsddeDNyqdvdedGLLG---DkTLNK 68  
XP_002493977   11 PPPGYVAGLGRGATGFT---Tqadvgtgrivpasfs-------deesddedfvddrfkDAdetenglNGFK-----EKDD 75  
XP_007375886   11 PPPGYIPGIGRGAVGFV---Tsvdtfnkglavtqae----------------edeeevydsnganeeGILA---TtRQDA 68  
EAZ62934       11 PPPGYISGIGRGATGFT---Tsadtgslqpgftien--------geesddnlageigdEG-------AILA--SGkNRDK 70  
Q6BSY2         11 PPPGYVAGIGRGATGFT---Tsadagsvriqpgvvvld-------------neeedingnaedenddGLLG--KKlNRDQ 72   Debaryomyces ...
CCE73277       11 APDGYIPGVGRGATGFT---Tsadsgglafqqglvle---------------saseddeaqntnnddGILG--SKkHQDK 70  
XP_006687813   11 APAGYVAGVGRGATGFV---Tsadagglrsvrpfe------------------psdseddngdnnslGLLG-----GQSK 64  

5ZWO_N         63 EDDEAANVFKTLELKLAQKKKKRANEKDDDNSVd--------------sSNVKRQFADLKESLAAVTESEWMDIPDATDF 128  Saccharomyces...
XP_002180133  131 DDDEADRIWAAIDERVQSRKRKSQQRKEETVATsaet--------dnarVRIGSQFRELKEKLKDVSEDQWAAIPDVGDH 202 
EFC49970       80 EDKEADSIWSAISQRMENKKKRKNVTENENQTSkyakysvltssldsqkPKIAATFSDIKEELKYLSKEEW-NIPEVSGS 158 
XP_011276801   69 EDEEADEIYQEIDNRLKNRNKRRISPNDDATTTgnngn-------ddnlTKISNQFVDLKKNLSSISEDQWANLPEVGDL 141 
XP_002493977   76 SDNEADQVFAEIEERLKRRNKRKNEVQEDEEPL----------------DEIKKNFQELKKNLTSISEEEWFNLPESGDL 139 
XP_007375886   69 DDEEADRIYEQIDQRLQSKQKQEITTVEKDNKV---------------------NFTDLKRDLARVSEEQWELLPEAGDI 127 
EAZ62934       71 EDEEADQIYEEIERKLQRRKVLKEEAVSEAENQs---------------YEIKSKFSDLKRSLSSISAEQWEALPEVGDI 135 
Q6BSY2         73 DDEEADKIYEEIDRRMKRKRKDTPDDETSLEAV----------------NHTKEQFADLKRALSSVSDEQWESLPEVGDL 136  Debaryomyces ...
CCE73277       71 DDLEADKVYEEIERKLMKKKGNKEPDEVTKKDDs---------------VGMKEQFSDLKRALTNVSDFEWQNLPEAGDF 135 
XP_006687813   65 DDEEADRVYDEVERRLQKRHKNTSQLEVVQQDEe---------------NQIAQQFTDLKRHLAHVSQDEWANLPEASDF 129 

5ZWO_N        129 TRR 131  Saccharomyces cerevisiae S288C
XP_002180133  203 SIK 205 
EFC49970      159 AVN 161 
XP_011276801  142 TKR 144 
XP_002493977  140 TRK 142 
XP_007375886  128 TRR 130 
EAZ62934      136 TRR 138 
Q6BSY2        137 TRR 139  Debaryomyces hansenii
CCE73277      136 TRR 138 
XP_006687813  130 TKR 132
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