Conserved Protein Domain Family
PBC

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pfam03792: PBC (this model, PSSM-Id:461052 is obsolete and has been replaced by 461052)
PBC domain
The PBC domain is a member of the TALE (three-amino-acid loop extension) superclass of homeodomain proteins.
Statistics
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PSSM-Id: 461052
Aligned: 15 rows
Threshold Bit Score: 236.89
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_013977855   11 STPDVLGEQLKKTCLSSSCSa-CwndRKHALNCHRMKPALFSVLCEIKEKTVLSIHGIQEEGPSNAQLMRLDNMLLAEGV 89  
XP_019959538   40 DIGDILQQIMTITDQSLDEAq-A---RKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDPQLMRLDNMLLAEGV 115 
ESN94880       26 DISDILQQIMTITDQSLDEAq-A---RKHTLNCHRMKPALFQVLCEIKEKTVLSLRGPQDDEPADPQLLRLDNMLIAEGV 101 
P41779          8 NLSELLDAVLKINEQTLDDNdsA---KKQELQCHPMRQALFDVLCETKEKTVLTVRNQVDETPEDPQLMRLDNMLVAEGV 84   Caenorhabditi...
PDM63182      719 PVSDLVQRLEMLTVLPLENN--TveqGTYRLKNHYLYSTMFSIFVDLKERTRMVVH----EEDEKDPQIRLDNMLAAEGV 792 
CAP25808        6 NLAELLAEVTKITDMTLDEN--AmnsLKCQIRVNPLHRAMQSVLIDNKEKVSISPRPALCPVNNQNEK-MLDNMLTAEGI 82  
Q19503          7 SIMDLLSEVVKITDMTMDNE--AvnkLKPQIKINPFYRAVQDVLVEQKSKIDLSTKMMKDLEAQENDE-RLDTMLKAEGV 83   Caenorhabditi...
2_pfamImport    1 PIQHFLDELIKISTMEPDVD--VmanLKQSMRSNPFYPVIREVLIEQKERTVLSTQMIK-EELIEDEEERSNKMLEKEGI 77  
XP_008251477   19 DTSGVLQQIMAITYQSLDEAq-A---SKHALHCHRMQPALFSVLCEIKEKAVVSICCPQEEEPPGAQLLRLDGMLLAEGV 94  
Q99NE9         26 DTSDVLQQIMAITDQSLDEAq-A---RKHALNCHRMKSALFSVLCEIKGKTAVSIQFQEED-PPDAQLLRLDNMLLAEGV 100  house mouse
XP_013977855   90 SRPERRGRGGSAaaantatpggcpnDNSLEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLREQSRMRPVSPKE 169 
XP_019959538  116 AGPEKGGGSAAAaaaaaa-tggvgaDNSAEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKE 194 
ESN94880      102 AGPEKVGGSLASssqsl----agnqENAIEHSDYRAKLAQIRQIYHTELEKYEQACSEFTAHVVNLLREQGCTRPIAPKE 177 
P41779         85 AGPDKGGSLGSD-------------ASGGDQADYRQKLHQIRVLYNEELRKYEEACNEFTQHVRSLLKDQSQVRPIAHKE 151  Caenorhabditi...
PDM63182      793 IGPEKDLPASLN-------------NQPLDQDDYRYQLHNIRQQFEMEMSEREHHQQTFINNTRQLMKLQSETRPISELD 859 
CAP25808       83 VVPGCDPSHVADi---------------kREPDFNRELNSVQNDLNQEIGACHKRRAEFSETVSNVIRSQGEFRPITHKD 147 
Q19503         84 AGPDDSLLRIQE-------------AAGTDQYEYRQQLLKVRRELENETKAFDKHCKKWCEYVEDVLQQQGEFRPITQQS 150  Caenorhabditi...
2_pfamImport   78 TGPDYSISPEAI---------------GSDQDEYRQKLKLVRKSFEENMNNYAVNCRDFSENIRSILREQSEFRPITATA 142 
XP_008251477   95 AGaaaps--------------gcpnGGRTERSDYRAQLAQIRQRYRSELEKYEQACGEFTTHVTHLLREQGRMRPVSALE 160 
Q99NE9        101 SRPEKRGRGAAAgstatp--ggcpnDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLREQSRVRPVSCRE 178  house mouse
XP_013977855  170 IERMVGVIHGKFNAIQMQLKQSTCEAVMTLRSRFLD 205 
XP_019959538  195 IERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLD 230 
ESN94880      178 IDRMVSIVRKKFTAIELQLKQSTCEAVMILRSRFLD 213 
P41779        152 IERMVYIIQRKFNGIQVQLKQSTCEAVMILRSRFLD 187  Caenorhabditis elegans
PDM63182      860 LGRVESAVRKKLVYYQIQLKQETCEQIMTLKSKFCD 895 
CAP25808      148 IECMSNMVSHKFQKVIECAKQRSCENVTHLKRVYMD 183 
Q19503        151 TEKFMNKMSGKFNKVCFVLKQTACEEVIQLKKRYLD 186  Caenorhabditis elegans
2_pfamImport  143 IEKLLSMTGNKMNRIIKLLKHSACAAIIHLQKRYFD 178 
XP_008251477  161 MERMVGVIRGRFRAIQTQLKQSTCEAVMTLRSRFLD 196 
Q99NE9        179 MEHMVNTIQSKFSAIQRQLKQSTCEAVMTLRSRFLD 214  house mouse
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