5W7B,5W7F,3RFI,5U85


Conserved Protein Domain Family
SapB_2

?
pfam03489: SapB_2 (this model, PSSM-Id:460945 is obsolete and has been replaced by 460945)
Saposin-like type B, region 2
Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. It is one of the most studied members of the saposin protein family and it is involved in the hydrolysis of glycolipids and glycerolipids. SapB is unique in the saposin family in that it facilitates degradation by interacting with the substrate, not the enzymes.
Statistics
?
PSSM-Id: 460945
Aligned: 461 rows
Threshold Bit Score: 27.1547
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5W7B_A        68 TACYMMVHVFGADIIKLFDKD--VNADVVCHTLEFC 101 rabbit
XP_040034367 236 AMCKQYVDQYGSLVIQQLMSMe-QAPKDICVHAGFC 270
O13035       238 DMCKSYISEYSDLAIQMMMHMkdQQPKDICAMVGFC 273 chicken
P10960       238 DICKNYVDQYSEVAVQMMMHM---QPKEICVMVGFC 270 Norway rat
P26779       240 DMCKNYINQYSEVAIQMVMHM---QPKEICVLAGFC 272 cattle
XP_005996175 238 DICKDYVSQYAPVVIQTLLNM---KPKDLCTQAGFC 270
XP_023365249 197 DMCKNYITQYSQIAVQMMMHMqdQQPQEICRLVGFC 232
XP_028915573 277 DMCKNYINQYSDLVVQMVLHM---QPKDICGMAGFC 309
XP_007505702 243 DMCKNYISQYSDIAVQMLMHM---GPKEICSYAGFC 275 gray short-tailed opossum
XP_029691152 243 SLCREYVSQYSSLVVDQLMTM---QPKDICTHAGFC 275 torafugu
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap