Conserved Protein Domain Family
BESS
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pfam02944: BESS (this model, PSSM-Id:460758 is obsolete and has been replaced by 460758)
BESS motif
The BESS motif is named after the proteins in which it is found (BEAF, Suvar(3)7 and Stonewall). The motif is 40 amino acid residues long and is composed of two predicted alpha helices. Based on the protein in which it is found and the presence of conserved positively charged residues it is predicted to be a DNA binding domain. This domain appears to be specific to drosophila.
Links
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Statistics
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PSSM-Id: 460758
Aligned: 100 rows
Threshold Bit Score: 30.4329
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WGS:AAQB:GK22897-PA  129 TSLYgGFLLDQLPFVEALSQLQRRRLEVEIVDAILQ 164 
6_pfamImport           1 --IK-MFLLGLVPELEQMTNQQLRMFRRRILQTIDE 33  
XP_028026666         188 DVDS-QFLLSFRDDMNAMSRSQKLKFKLGMIQLIQh 222 
Q17I54               219 kSDE-FFLLSLKDDMRRMNMTQKRKFKRRIFDIIDE 253  yellow fever mosquito
XP_002070008         358 DPDQ-AFFDSIKPHMQLMSNARKLDFQIEVLQLLRN 392 
WGS:AAQB:GK12702-PA  269 DFDD-AFLQSLRPEIKHMNFHQKLYFKRRVYDLLGE 303 
XP_002027009         189 NPDD-AFLQGLRPEMEQMNFRKKLYFKSRVYALLGE 223 
FlyBase:CG3836-PB    565 FSDN-YFLEMIKPQMQEMNPRQKMHFKKKVFQALME 599 
XP_002048388         583 FSDE-HFLDMVRPQMKEMNPRQKMHFKQKIFQALME 617 
EDW34090             325 fTDQ-HFLEIVRPQMAEMNPRQKLNFKKKVFHSLIE 359
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