Conserved Protein Domain Family
RRM4_RBM45

?
cd12369: RRM4_RBM45 
RNA recognition motif 4 (RRM4) found in RNA-binding protein 45 (RBM45) and similar proteins
This subfamily corresponds to the RRM4 of RBM45, also termed developmentally-regulated RNA-binding protein 1 (DRB1), a new member of RNA recognition motif (RRM)-type neural RNA-binding proteins, which expresses under spatiotemporal control. It is encoded by gene drb1 that is expressed in neurons, not in glial cells. RBM45 predominantly localizes in cytoplasm of cultured cells and specifically binds to poly(C) RNA. It could play an important role during neurogenesis. RBM45 carries four RRMs, also known as RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains).
Statistics
?
PSSM-Id: 409804
Aligned: 12 rows
Threshold Bit Score: 117.393
Created: 18-Nov-2011
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q8IUH3       393 RLFIVFNPhplpLDVLEDIFCrfgnLIEVYLVsgkNVGYAKYADriSANDAIATLhgkilNGVRLKVM 460 human
NP_001120874 384 RLFVIFNPsplpVEVLEDVFCrfgsLIEVYLVpgrNVGYIKYADrrSAHDAIDTMhgkvvNGVKMKVM 451 zebrafish
NP_001026423 419 RLFVLFHPhplpVTILEDVFCrfgnLIKVYLVagkNVAYAKFADraSASEAITALhgkivNGVRLKVR 486 chicken
NP_001080090 393 RLFIVFNPhplsLDIMEDAFCrfgnLIEVYIVpgkNVGYARYADvsSANEAIAVLhgkmvNGVKLKVM 460 African clawed frog
EFX90035     502 RLFIVCQPtpppIYVLKDIFGrfghLIDVYMLggrSCGYAKYADkdSADRALMTLhgqevCGSRLKVM 569 common water flea
XP_002163488 445 RLFIVCQPspppDHILKDIFSrfgdLIDVFMLknkNFGYAKYSSieSAEAAIQTLhgaeiLGKKLKVL 512 green hydra
XP_002586890 274 RLFIVCTPtappEYALKDVFSrfgkLIDVYLMrdkNYGYAKYAQkvNAEAAIESLhgqeiCGQRLKVM 341 Florida lancelet
NP_647887    383 RLFIVLSAnl-pHSILKNIFScwsgLIDVYLLpnkNCGYVKYAEveSAQLAIRTLngaeiCGTKIKVM 449 fruit fly
XP_003382631 433 RVFFVCNPsppsDQVLRSVFGrfgvLTDIWVIrgkNYGYAKFVTrqAAESAITALhgmevFGVKLKVM 500 Amphimedon queenslandica
XP_001945010 369 RLFFVCKPiippMRLLEDTFKmfkgLRNINVIdgkNYGYVTYDNleSATRAINCLndhkvYNSRLKVM 436 pea aphid
XP_006012349 395 RLFLVFNPaplpLDILEDVFCrfgyLIEVYLVpgrNVGYAKFANrtSANDAITAIhgkviNGVKLKVM 462 coelacanth
XP_007888259 412 RLFVVFNPavlpLDILEDLFCrygnLIDVYLVpgrNIGYVKFAEraNAAEAMEALhgkvvNGVKLKVM 479 elephant shark
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap