6O3O


Conserved Protein Domain Family
IgC1_2_Nectin-2_Necl-5_like

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cd07703: IgC1_2_Nectin-2_Necl-5_like 
Second immunoglobulin (Ig) domain of Nectin-2 and Nectin-like protein 5, and similar domains; member of the C1-set of the Ig superfamily (IgSF) domains
The members here are composed of the second immunoglobulin (Ig) domain of nectin-2 (also known as poliovirus receptor related protein 2 or Cluster of Differentiation 112 (CD112)), nectin-like protein 5 (CD155), and similar proteins. Nectins and Nectin-like molecules are a family of Ca(2+)-independent immunoglobulin-like transmembrane glycoproteins belonging to the class of adhesion receptors, consisting of nine members (nectins 1 through 4 and nectin-like proteins 1 through 5). Nectins are synaptic cell adhesion molecules (CAMs) which facilitate adhesion and signaling at various intracellular junctions. Nectins form homophilic cis-dimers, followed by homophilic and heterophilic trans-dimers involved in cell-cell adhesion. Nectin-2 and nectin-3 localize at Sertoli-spermatid junctions where they form heterophilic trans-interactions between the cells that are essential for the formation and maintenance of the junctions and for spermatid development. CD155 is the fifth member in the nectin-like molecule family, and functions as the receptor of poliovirus; therefore, CD155 is also referred to as Necl-5, or PVR. In contrast to all other family members, CD155 lacks self-adhesion capacity, yet it shares with nectins the feature to interact with other nectins. For instance, CD155 heterophilically trans-interacts with nectin-3, thereby contributing significantly to the establishment of adherens junctions between epithelial cells. This group belongs to the Constant 1 (C1)-set of IgSF domains, which has one beta-sheet that is formed by strands A-B-E-D and the other strands by G-F-C-C'.
Statistics
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PSSM-Id: 409500
Aligned: 11 rows
Threshold Bit Score: 151.015
Created: 3-May-2009
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:Ig strand A [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #######                                                                         
6O3O_C       120 PQNTAEVQkvql--tgepVPMARCVSTgGRPPAQITWHSDLGGMPNTSQVPGFlsgTVTVTSLWILVPSSQVDGKNVTCK 197 human
P15151       145 PQNTAEVQkvql--tgepVPMARCVSTgGRPPAQITWHSDLGGMPNTSQVPGFlsgTVTVTSLWILVPSSQVDGKNVTCK 222 human
XP_001519017 147 PQNQAWTQevtq--ssapAPVAFCVST-GLPAARLSWSTSLNHEANITQEELPn-gTITVTSQLSLLPTRNVHGQSVTCK 222 platypus
CAF97805     114 PQNSASIVtvea--gtspVVVARCDSVdGRPASEVKWVTTANGNATSLSKINAd-nTVTINSEYRMVPKPEDNGKDISCV 190 Tetraodon nigro...
Q92692       162 PKNQAEAQkvtf--sqdpTTVALCISKeGRPPARISWLSSLDWEAKETQVSGTlagTVTVTSRFTLVPSGRADGVTVTCK 239 human
NP_081790    145 PKNTAEALepsp--tlilQDVAKCISAnGHPPGRISWPSNVNGSHREMKEPGSqpgTTTVTSYLSMVPSRQADGKNITCT 222 house mouse
ABQ59659      99 PKNSAFPVivqastsgkpVVVAKCEAAdGKPAATIKWMGEVGGTENTTSKKGLd-gTVTVMGEYLLVPTPEDNGKEVTCM 177 Atlantic salmon
XP_689309    152 PKNTATTVtvsa--gktpVIVARCESSnGRPAATITWSTALNGNVTTPKKTDNpdnTVSIQSVYMLAPQPEDNGKDISCI 229 zebrafish
XP_001375055 121 PKSHAESYevas--gpdpVTMASCVSSgGRPPARISWSSLLAGQSHETRTAEPgsdTFTVTSHLTQVPMARANGEKAICK 198 gray short-tail...
CAK05488     121 PKNSATAIpvra--gtseVVVATCAAAqGKPEATISWITTITGRYNHTSVPESd-gTVTVKSEYRMIPTPVENGKEITCV 197 zebrafish
NP_001087644 125 PKNSAEAIpvva--gdieVPVAKCASAnGKPPSQITWRSTLPGNFDMTVNNNTd-gTYTVVSSFKLIPTWTADKQEVICV 201 African clawed ...
Feature 1                           
6O3O_C       198 VEHESfeKPQLLTVNLTVY 216 human
P15151       223 VEHESfeKPQLLTVNLTVY 241 human
XP_001519017 223 VEHETlqEPQMLPVTLAIR 241 platypus
CAF97805     191 VTHRTlnKPDSFSLKLVVQ 209 Tetraodon nigroviridis
Q92692       240 VEHESfeEPALIPVTLSVR 258 human
NP_081790    223 VEHESlqELDQLLVTLSQP 241 house mouse
ABQ59659     178 ISQRTqdKPQIFPMKLSVE 196 Atlantic salmon
XP_689309    230 VSHRTmaQPETFPMKLVVE 248 zebrafish
XP_001375055 199 VEHETlrEPALLSVTLAVR 217 gray short-tailed opossum
CAK05488     198 VNQRTqmEDKVFNLKLVVE 216 zebrafish
NP_001087644 202 ISYDS--KETPIPVTLSVQ 218 African clawed frog

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