4Z6G,3F7P


Conserved Protein Domain Family
CH_PLEC-like_rpt2

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cd21189: CH_PLEC-like_rpt2 
second calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
This family includes plectin, dystonin and microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 (MACF1). Plectin, also called PCN, PLTN, hemidesmosomal protein 1 (HD1), or plectin-1, is a structural component of muscle. It interlinks intermediate filaments with microtubules and microfilaments, and anchors intermediate filaments to desmosomes or hemidesmosomes. It could also bind muscle proteins such as actin to membrane complexes in muscle. Dystonin, also called 230 kDa bullous pemphigoid antigen, 230/240 kDa bullous pemphigoid antigen, bullous pemphigoid antigen 1 (BPA or BPAG1), dystonia musculorum protein, or hemidesmosomal plaque protein, is a cytoskeletal linker protein that acts as an integrator of intermediate filaments, actin, and microtubule cytoskeleton networks. It is required for anchoring either intermediate filaments to the actin cytoskeleton in neural and muscle cells, or keratin-containing intermediate filaments to hemidesmosomes in epithelial cells. MACF1, also called 620 kDa actin-binding protein (ABP620), actin cross-linking family protein 7 (ACF7), macrophin-1, or trabeculin-alpha, is a large protein containing numerous spectrin and leucine-rich repeat (LRR) domains. It facilitates actin-microtubule interactions at the cell periphery and couples the microtubule network to cellular junctions. Members of this family contain two copies of the CH domain. This model corresponds to the second CH domain. CH domains are actin filament (F-actin) binding motifs.
Statistics
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PSSM-Id: 409038
Aligned: 14 rows
Threshold Bit Score: 196.459
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative actin
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:putative actin binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens filamin-A binds F-actin.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #   #                                                   # ##  ## #        #####
4Z6G_A         122 SAKEKLLLWTQKVTAGYtgiKCTNFSSCWSDGKMFNALIHRYRPDLVDmer--vqiQSNRENLEQAFEVAER-LGVTRLL 198   human
3F7P_A         189 TAKEKLLLWSQRMVEGYqglRCDNFTSSWRDGRLFNAIIHRHKPLLIDmnk--vyrQTNLENLDQAFSVAERdLGVTRLL 266   human
RUS80694        32 TAKEALLLWSRRTTEGYpgvKIRDFSSSWRDGKAFLSILHRNRPDLIDirq--mrhNSNRQNLETAFNLAEReFGVTRLL 109   eastern eme...
CBY24169       420 TAKKALLQWARQNMDGYd-kKVNNFTTDWSDGMAFNVIMHRNKPEIIDltk--vsqMTNRERLANAFDTAEKkFGITPLL 496   Oikopleura ...
NP_501432      179 SARDALLQWAKRTTAEYprgNVINFSNSWRDGLAFNAIIHRYRSSAIDwnkinsdsVSNTERLNIAFAAADReFGVERLL 258   Caenorhabdi...
ELU00280       102 SAKEALLLWCRRTVDGYpgvQIRNFTNSWRDGKAFLSIIHRHRPDLVDfrr--vsrQTARENLEMAFNIAEKeFGVTRLL 179   Capitella t...
GBM08716        20 TAREALLRWAQRTTERYpgvRITDFTSSWRDGLAFNAILHRNRPDILDfks--lrsRKAKDNLELAFSLAEKeFGITRLL 97    Araneus ven...
AAF24340       223 SAREALLRWARRSTARYpgvRVNDFTSSWRDGLAFSALVHRNRPDLLDwrk--arnDRPRERLETAFHIVEKeYGVTRLL 300   fruit fly
XP_013417096   174 NAKDALLLWSRRTCEGYpgvNVRDFSSSWRDGKAFLAVIHRNRPDLVNyra--irnNTPEKNLELAFNIAEKeLGVTRLL 251   Lingula ana...
XP_006822599   174 NVKEALLLWSRRTTDGYpgvNIKDFSRSWRDGLAFNAILHRNRPELIDfks--lsrDDHKANLENAFSVAENhFGVTRLL 251   Saccoglossu...
Feature 1          ####      # ## ##  ##  #   
4Z6G_A         199 DAEDVDVpsPDEKSVITYVSSIYDAFP 225   human
3F7P_A         267 DPEDVDVpqPDEKSIITYVSSLYDAMP 293   human
RUS80694       110 DVDDVDVpnPDEKSVLTYVSSLYDVFP 136   eastern emerald elysia
CBY24169       497 DPEDVDVpkPDEKSIITYVSSLYDVFP 523   Oikopleura dioica
NP_501432      259 DAEDVDTnnPDEKSIITYVSSLYNALP 285   Caenorhabditis elegans
ELU00280       180 DPEDVDVnePDEKSLITYVSSLYDVFP 206   Capitella teleta
GBM08716        98 DAEDVDTpePDEKSIITYISSMYDVFP 124   Araneus ventricosus
AAF24340       301 DPEDVDTnePDEKSLITYISSLYDVFP 327   fruit fly
XP_013417096   252 DPEDIAVpqPDEKSVLTYVSSLYNVFP 278   Lingula anatina
XP_006822599   252 DPEDVDRvdPDDKSIMTYVSSMYDVFP 278   Saccoglossus kowalevskii

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